Factsheet for TraesCS6A01G024300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS6A01G251400.1
TraesCS6B01G273900.1
TraesCS6D01G233200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G61590.1	TraesCS6A01G251400.1	AT3G48150.1	21798944
AT1G61590.1	TraesCS6B01G273900.1	AT3G48150.1	21798944
AT1G61590.1	TraesCS6D01G233200.1	AT3G48150.1	21798944
AT1G61590.1	TraesCS1A01G177600.1	AT4G39050.1	21798944
AT1G61590.1	TraesCS1B01G202600.1	AT4G39050.1	21798944
AT1G61590.1	TraesCS1D01G176100.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G033300.1	Wheat	cytosol	95.15	95.15
TraesCS6D01G027700.1	Wheat	cytosol	94.23	94.44
OQU92552	Sorghum	plastid	76.21	75.51
Zm00001d029258_P001	Maize	mitochondrion, plastid	74.83	75.0
Zm00001d047437_P001	Maize	plastid	74.6	73.41
Os03t0364400-01	Rice	plasma membrane	75.52	73.15
CDY65104	Canola	cytosol	26.79	68.24
CDY52677	Canola	cytosol	10.62	63.01
GSMUA_Achr2P17920_001	Banana	cytosol	55.43	62.83
VIT_02s0087g00270.t01	Wine grape	plastid	57.51	58.73
KRH39720	Soybean	plastid	56.35	57.68
Solyc08g074980.2.1	Tomato	plastid	56.12	57.58
PGSC0003DMT400040626	Potato	plastid	55.89	57.48
AT1G61590.1	Thale cress	plastid	54.5	55.66
Bra031421.1-P	Field mustard	plastid	53.58	55.5
CDY47586	Canola	plastid	53.35	55.4
KRH76414	Soybean	plastid	56.58	55.18
Bra038591.1-P	Field mustard	plastid	53.12	54.25
CDY26353	Canola	plastid	52.89	54.01
CDY52676	Canola	cytosol, nucleus, plastid	21.02	53.22
TraesCS5A01G497700.1	Wheat	mitochondrion, plastid	27.48	51.29
TraesCS4A01G073500.1	Wheat	cytosol, plastid	44.34	50.66
CDY03843	Canola	plastid	36.03	50.65
KRH07729	Soybean	cytosol	50.12	49.43
TraesCS4A01G010000.1	Wheat	mitochondrion, plastid	48.04	47.93
TraesCS1A01G138100.1	Wheat	plastid	39.72	47.12
TraesCS4A01G191500.1	Wheat	cytosol	44.34	46.83
TraesCS7A01G163300.1	Wheat	cytosol	45.5	46.03
TraesCS2A01G170600.1	Wheat	cytosol	47.81	46.0
TraesCS5A01G144600.1	Wheat	mitochondrion, plastid	46.19	45.87
TraesCS5A01G210300.1	Wheat	plastid	46.88	45.41
TraesCS7A01G416100.1	Wheat	mitochondrion	39.72	45.03
TraesCS5A01G210200.1	Wheat	plastid	45.96	44.62
TraesCS5A01G215200.1	Wheat	plastid	46.65	44.59
TraesCS5A01G215400.1	Wheat	plastid	46.19	43.96
TraesCS1A01G110000.1	Wheat	plastid	46.19	41.93
TraesCS6A01G336600.1	Wheat	mitochondrion	44.8	41.63
CDY65105	Canola	cytosol	5.31	41.07
CDY65103	Canola	plastid	13.86	37.74
TraesCS4A01G031000.1	Wheat	plastid	38.8	37.33
TraesCS7A01G487900.1	Wheat	cytosol	40.18	36.33

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF14	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6A01G024300	EnsemblPlants:TraesCS6A01G024300.1	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr6A:-:12117881..12120107

Molecular Weight (calculated)

47586.9 Da

IEP (calculated)

9.037

GRAVY (calculated)

-0.346

Length

433 amino acids

Sequence
(BLAST)

001: MPRPWREVLA SATKCWSAEE DDEAADARNY RPPNSEFSRR LASFRRLSAL ANGPATPTDG KDDEDNPDGV GEMGVGTMQQ LHSFSLSELR GVTHDFSSGY
101: LLGEGGFGAV HKGFVDAGMR PGLEPQPVAV KQLNIAGHQG HREWLAEVIF LGQFRHQHLL KLLGYCYEDE ERLLVYEFMP RGSLDNHLFK RISATLPWNT
201: RLKVAISTAK GVAFLHGGKQ PVIYRDLKAS NILLDSDFTA KLSDFGLAKM GPEGDETHVS TRVMGTHGYA APEYVQTGHL TVKSDVYSFG VVLLELLTGR
301: RAMEHVPGRT ARAEQTIKLV EWTRPYLASS RRLRCIMDQK LSGHYSVKGA RAMAHLAVQC TSPQPRDRPS MAAIVEALEQ LEGLKDMAVS MGLFWPTAPA
401: AGRNALSAKF RAEMKGAGTG AVPRRRTASA NLS

Best Arabidopsis Sequence Match ( AT1G61590.1 )
(BLAST)

001: MRDSSTTAST KSSPLWKPFA SNCCSVDDQT VFGNLSRCRP SRSEFSKNHL GPLPSFRRLS FADLSRSSSA RINEDLAQTL GADLVDFQMC ELKMITQSFS
101: GNYLLGEGGF GKVYKGYVDD YLRQSLKAQP VAVKLLDIEG LQGHREWLSE VIFLGQLKHP NLVKLIGYCC EEEERVLIYE FMPRGSLENH LFRRISLSLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW SKPYLTSSRR LRCVMDPRLA GQYSVKAAKD TALLALQCVS PNPKDRPKML AVVEALESLI HYKDMAVSSG HWPLSPKSQG
401: GKVSPKVRGD HRSGRKSAPG SLRS

Arabidopsis Description

PBL15Probable serine/threonine-protein kinase PBL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.