Factsheet for PGSC0003DMT400040626

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400008772
PGSC0003DMT400063189

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G61590.1	PGSC0003DMT400063189	AT3G48150.1	21798944
AT1G61590.1	PGSC0003DMT400008772	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g074980.2.1	Tomato	plastid	98.81	98.58
KRH39720	Soybean	plastid	79.57	79.2
VIT_02s0087g00270.t01	Wine grape	plastid	78.38	77.83
CDY65104	Canola	cytosol	30.88	76.47
KRH76414	Soybean	plastid	79.81	75.68
CDY52677	Canola	cytosol	12.35	71.23
AT1G61590.1	Thale cress	plastid	70.31	69.81
CDY03843	Canola	plastid	51.07	69.81
Bra031421.1-P	Field mustard	plastid	68.65	69.14
CDY47586	Canola	plastid	68.41	69.06
Bra038591.1-P	Field mustard	plastid	69.36	68.87
CDY26353	Canola	plastid	68.88	68.4
GSMUA_Achr2P17920_001	Banana	cytosol	61.28	67.54
CDY65103	Canola	plastid	25.42	67.3
CDY52676	Canola	cytosol, nucleus, plastid	24.23	59.65
HORVU6Hr1G032540.8	Barley	mitochondrion, plastid	60.57	59.3
OQU92552	Sorghum	plastid	59.62	57.44
Zm00001d029258_P001	Maize	mitochondrion, plastid	58.43	56.94
TraesCS4D01G166800.1	Wheat	cytosol	60.33	56.82
Zm00001d047437_P001	Maize	plastid	59.14	56.59
Os03t0364400-01	Rice	plasma membrane	59.86	56.38
TraesCS4B01G162700.1	Wheat	cytosol	59.62	56.15
TraesCS6D01G027700.1	Wheat	cytosol	57.48	56.02
TraesCS6A01G024300.1	Wheat	cytosol	57.48	55.89
TraesCS6B01G033300.1	Wheat	cytosol	57.48	55.89
PGSC0003DMT400005987	Potato	plastid	52.02	53.16
PGSC0003DMT400007503	Potato	cytosol	47.27	53.07
PGSC0003DMT400071214	Potato	cytosol	52.73	52.11
PGSC0003DMT400071701	Potato	cytosol	52.73	50.57
PGSC0003DMT400011147	Potato	mitochondrion, plasma membrane, plastid, vacuole	50.59	50.24
PGSC0003DMT400061697	Potato	cytosol, plastid	45.84	50.0
PGSC0003DMT400033828	Potato	cytosol	48.69	47.34
PGSC0003DMT400012413	Potato	cytosol	50.59	45.91
PGSC0003DMT400035255	Potato	cytosol	47.03	44.8
CDY65105	Canola	cytosol	4.75	35.71

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102583701	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BA56	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400015708
PGSC:PGSC0003DMG400015708	EnsemblPlants:PGSC0003DMT400040626	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF495	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294A321	RefSeq:XP_006363868.1	SEG:seg	:	:

Description

Receptor serine-threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400015708]

Coordinates

chr8:+:46277396..46281001

Molecular Weight (calculated)

47092.7 Da

IEP (calculated)

9.894

GRAVY (calculated)

-0.347

Length

421 amino acids

Sequence
(BLAST)

001: MTKDSKSWRP FTANCCSADD QTIFGNFSRC KTSKSDFSKN IGPLPSFRRL SFSDLSRSSS TRINEDLAQT FGPDLFDFQV SELRAITQNF STNYLLGEGG
101: FGTVHKGYVD ENLRSSLKSQ AVAVKLLNIE GLQGHREWLA EVIFLGQLRH KNLVRLIGYC CEDEERLLVY EFMPKGSLEN HLFKRLAMSL PWGTRLKIAI
201: GAAKGLAFLH GAEKPVIYRD FKTSNILLDS DFTAKLSDFG LAHMGPEGSN THVTTRVMGT YGYAAPEYVS TGHLTTRSDI YSFGVVLLEL LTGRRAMDKT
301: RPKNEQNLVD WTRPYLSSSR RLRCIMDPRF GGQYSVKGAK EMAHLASLCT SLNPKDRPKM PAIIETLEAI QPLRDMAVAC GQWPPSPKSS NKYVVYAPKG
401: NKDSKIVVIK NSRMGVNIKS K

Best Arabidopsis Sequence Match ( AT1G61590.1 )
(BLAST)

001: MRDSSTTAST KSSPLWKPFA SNCCSVDDQT VFGNLSRCRP SRSEFSKNHL GPLPSFRRLS FADLSRSSSA RINEDLAQTL GADLVDFQMC ELKMITQSFS
101: GNYLLGEGGF GKVYKGYVDD YLRQSLKAQP VAVKLLDIEG LQGHREWLSE VIFLGQLKHP NLVKLIGYCC EEEERVLIYE FMPRGSLENH LFRRISLSLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW SKPYLTSSRR LRCVMDPRLA GQYSVKAAKD TALLALQCVS PNPKDRPKML AVVEALESLI HYKDMAVSSG HWPLSPKSQG
401: GKVSPKVRGD HRSGRKSAPG SLRS

Arabidopsis Description

PBL15Probable serine/threonine-protein kinase PBL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.