Factsheet for TraesCS4D01G166800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS6A01G251400.1
TraesCS6B01G273900.1
TraesCS6D01G233200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G61590.1	TraesCS6A01G251400.1	AT3G48150.1	21798944
AT1G61590.1	TraesCS6B01G273900.1	AT3G48150.1	21798944
AT1G61590.1	TraesCS6D01G233200.1	AT3G48150.1	21798944
AT1G61590.1	TraesCS1A01G177600.1	AT4G39050.1	21798944
AT1G61590.1	TraesCS1B01G202600.1	AT4G39050.1	21798944
AT1G61590.1	TraesCS1D01G176100.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G162700.1	Wheat	cytosol	96.2	96.2
HORVU6Hr1G032540.8	Barley	mitochondrion, plastid	91.5	95.12
TraesCS6D01G027700.1	Wheat	cytosol	81.88	84.72
Os03t0364400-01	Rice	plasma membrane	80.76	80.76
Zm00001d029258_P001	Maize	mitochondrion, plastid	77.85	80.56
OQU92552	Sorghum	plastid	78.75	80.55
Zm00001d047437_P001	Maize	plastid	76.96	78.18
CDY65104	Canola	cytosol	27.07	71.18
GSMUA_Achr2P17920_001	Banana	cytosol	58.84	68.85
CDY52677	Canola	cytosol	11.19	68.49
VIT_02s0087g00270.t01	Wine grape	plastid	59.96	63.21
KRH39720	Soybean	plastid	58.17	61.47
Solyc08g074980.2.1	Tomato	plastid	57.05	60.43
PGSC0003DMT400040626	Potato	plastid	56.82	60.33
AT1G61590.1	Thale cress	plastid	57.05	60.14
Bra031421.1-P	Field mustard	plastid	55.93	59.81
CDY47586	Canola	plastid	55.7	59.71
KRH76414	Soybean	plastid	58.17	58.56
Bra038591.1-P	Field mustard	plastid	55.48	58.49
CDY26353	Canola	plastid	55.26	58.25
CDY03843	Canola	plastid	38.48	55.84
TraesCS5D01G216500.1	Wheat	plastid	33.33	55.6
CDY52676	Canola	cytosol, nucleus, plastid	20.81	54.39
TraesCS4D01G231100.1	Wheat	cytosol	43.85	51.72
KRH07729	Soybean	cytosol	50.11	51.03
TraesCS4D01G293200.1	Wheat	mitochondrion, plastid	47.65	48.41
TraesCS7D01G165300.1	Wheat	cytosol	46.53	48.15
TraesCS1D01G134500.1	Wheat	plastid	39.15	47.95
TraesCS4D01G121800.3	Wheat	cytosol	43.85	47.8
TraesCS5D01G216800.1	Wheat	plastid	48.32	47.68
TraesCS2D01G178100.1	Wheat	cytosol	48.1	47.67
TraesCS6D01G316600.1	Wheat	mitochondrion	43.85	47.12
TraesCS5D01G147600.2	Wheat	plastid	45.86	47.02
TraesCS5D01G216600.1	Wheat	plastid	46.98	46.77
TraesCS5D01G216400.1	Wheat	cytosol, plastid	45.86	45.96
TraesCS7D01G409400.1	Wheat	cytosol	38.93	45.55
TraesCS4D01G273600.1	Wheat	plastid	39.6	45.38
TraesCS7D01G461900.1	Wheat	mitochondrion, peroxisome	45.41	45.31
CDY65103	Canola	plastid	16.11	45.28
CDY65105	Canola	cytosol	5.59	44.64
TraesCS1D01G091600.1	Wheat	plastid	45.86	43.25
TraesCS7D01G474600.1	Wheat	cytosol	40.72	38.16
TraesCS2D01G124300.1	Wheat	plastid	34.23	21.79
TraesCS2D01G123700.1	Wheat	mitochondrion, plastid	33.78	21.45

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF14	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS4D01G166800	EnsemblPlants:TraesCS4D01G166800.1	TIGR:cd14066	SEG:seg	:	:

Description

No Description!

Coordinates

chr4D:-:283881654..283883465

Molecular Weight (calculated)

49057.2 Da

IEP (calculated)

10.091

GRAVY (calculated)

-0.302

Length

447 amino acids

Sequence
(BLAST)

001: MHALHWTKGK DRGSERRMPR PWRPVLASAT KCCSSEDAVV AGDGLTRCRP ARSEFSRRLA SFRRLSSMTN SPATPRDGKD DEAAGEMGVG PMQLHSFSLN
101: ELRSVTHDFS SGYLLGEGGF GTVHKGFVDA GMRPGLEPQP VAVKQLDIAG HQGHREWLAE VIFLGQFRDQ HLVKLLGYCC EDEERLLVYE FMPRGSLENH
201: LFKRISATLP WGTRLKVAIG AAKGLAFLHG AKQPVIYRDF KASNILLDSE FTAKLSDFGL AKMGPEGEDT HVTTRVMGTH GYAAPEYVQT GHLTMKSDVY
301: SFGVVLLELL TGRRAMEHVR GRSAHAEQTI KLVEWTRPYL ASSRRLRCIM DPKLAGHYSV KGTRAVAHLA VQCTSAQPRD RPSMAAVVEA LERLEGLKDM
401: AVSIGLWPTA PVAGRNALSA KFRAEMKGAG TGNGAVLRRR SASAKLP

Best Arabidopsis Sequence Match ( AT1G61590.1 )
(BLAST)

001: MRDSSTTAST KSSPLWKPFA SNCCSVDDQT VFGNLSRCRP SRSEFSKNHL GPLPSFRRLS FADLSRSSSA RINEDLAQTL GADLVDFQMC ELKMITQSFS
101: GNYLLGEGGF GKVYKGYVDD YLRQSLKAQP VAVKLLDIEG LQGHREWLSE VIFLGQLKHP NLVKLIGYCC EEEERVLIYE FMPRGSLENH LFRRISLSLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW SKPYLTSSRR LRCVMDPRLA GQYSVKAAKD TALLALQCVS PNPKDRPKML AVVEALESLI HYKDMAVSSG HWPLSPKSQG
401: GKVSPKVRGD HRSGRKSAPG SLRS

Arabidopsis Description

PBL15Probable serine/threonine-protein kinase PBL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.