Factsheet for TraesCS1D01G091600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G110000.1	Wheat	plastid	97.05	96.44
TraesCS1B01G109400.1	Wheat	mitochondrion, plastid	95.99	83.79
EES13968	Sorghum	plastid	75.11	74.48
Zm00001d032069_P001	Maize	cytosol, plastid	73.42	73.26
KXG25279	Sorghum	plastid	75.32	73.01
TraesCS5D01G216800.1	Wheat	plastid	68.99	72.19
Os08t0457400-01	Rice	plasma membrane	72.57	71.97
TraesCS5D01G216400.1	Wheat	cytosol, plastid	67.3	71.52
TraesCS5D01G216500.1	Wheat	plastid	40.3	71.27
TraesCS5D01G216600.1	Wheat	plastid	66.03	69.71
HORVU1Hr1G019770.1	Barley	cytosol	89.66	68.22
GSMUA_Achr5P24670_001	Banana	cytosol	38.4	61.28
GSMUA_Achr10P...	Banana	cytosol	39.03	56.23
TraesCS6D01G316600.1	Wheat	mitochondrion	48.95	55.77
TraesCS4D01G231100.1	Wheat	cytosol	44.51	55.67
GSMUA_Achr8P22630_001	Banana	mitochondrion	45.99	55.47
TraesCS7D01G165300.1	Wheat	cytosol	48.95	53.7
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	49.58	53.53
TraesCS4D01G293200.1	Wheat	mitochondrion, plastid	47.68	51.36
GSMUA_Achr7P02350_001	Banana	cytosol	44.73	51.21
TraesCS1D01G134500.1	Wheat	plastid	37.97	49.32
TraesCS4D01G121800.3	Wheat	cytosol	42.62	49.27
TraesCS4D01G273600.1	Wheat	plastid	40.51	49.23
TraesCS2D01G178100.1	Wheat	cytosol	46.62	49.0
TraesCS7D01G461900.1	Wheat	mitochondrion, peroxisome	45.99	48.66
TraesCS5D01G147600.2	Wheat	plastid	43.46	47.25
TraesCS4D01G166800.1	Wheat	cytosol	43.25	45.86
TraesCS7D01G409400.1	Wheat	cytosol	36.5	45.29
TraesCS6D01G027700.1	Wheat	cytosol	41.14	45.14
TraesCS7D01G474600.1	Wheat	cytosol	40.51	40.25
TraesCS2D01G124300.1	Wheat	plastid	33.97	22.93
TraesCS2D01G123700.1	Wheat	mitochondrion, plastid	33.76	22.73

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF86
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	EnsemblPlantsGene:TraesCS1D01G091600	EnsemblPlants:TraesCS1D01G091600.1
TIGR:cd14066	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:77838634..77840645

Molecular Weight (calculated)

52467.5 Da

IEP (calculated)

8.852

GRAVY (calculated)

-0.397

Length

474 amino acids

Sequence
(BLAST)

001: MASAQPWKSM FCCVGAGAAV DEEGPSPSST PRRRRGERRT LLPSSSASTA SRVSLSSLGS TGTLTPEDLS LTLSGSNLHA FTYAELKAAT AGFSRSRYLG
101: CGGFGPVYKG QLAAELRPGL EAQTVAVKYL DLDSSSQGHN EWLAEVFFLG QLRHRNLVKL VGYCYEEEHR MLAYEFMGTG SLEKHLFRSI DGPMPWMTRM
201: KIAVGAAKGL AFLHGADTPV IFRDLKASNI LLDSDYTAKL SDFGLAKDGP NGDATHVTTR IMGTHGYAAP EYIMTGHLTA KSDVYSFGVV LLELLSGRRS
301: IDRARRSREQ SLVDYARPYL KKQDKLHRVM DPALECQYSS QGAELAARVA YKCLSQNSKL RPTMKEVVQA LEPILKMDDY LQVGTFVFTV VVENTDKSVE
401: NKGKLIDDEW KADMKVEKIV EDKHQSHQDR HRQKFPNSTI HADILLQRDG AIGPYTTALQ RHRRASSYTE ERGA

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.