Factsheet for GSMUA_Achr5P24670_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	74.41	67.17
GSMUA_Achr8P22630_001	Banana	mitochondrion	71.38	53.94
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	78.11	52.85
TraesCS5D01G216500.1	Wheat	plastid	47.47	52.61
GSMUA_Achr7P02350_001	Banana	cytosol	71.38	51.21
GSMUA_Achr7P11420_001	Banana	mitochondrion	60.61	50.28
GSMUA_Achr8P26730_001	Banana	cytosol	55.89	50.15
GSMUA_Achr1P26800_001	Banana	mitochondrion	54.21	48.94
GSMUA_Achr6P22050_001	Banana	plastid	55.89	47.29
GSMUA_Achr10P...	Banana	cytosol	53.2	47.16
GSMUA_Achr2P17920_001	Banana	cytosol	59.93	46.6
Os06t0202900-01	Rice	cytosol, plasma membrane	66.33	46.24
GSMUA_Achr3P02100_001	Banana	plastid	60.61	46.04
TraesCS6D01G316600.1	Wheat	mitochondrion	64.31	45.91
GSMUA_Achr7P19720_001	Banana	cytosol	52.86	45.77
Zm00001d018262_P001	Maize	cytosol, plastid	67.0	45.54
GSMUA_Achr10P...	Banana	cytosol	59.93	45.52
TraesCS7A01G163300.1	Wheat	cytosol	64.98	45.09
TraesCS7D01G165300.1	Wheat	cytosol	65.32	44.91
OQU85819	Sorghum	plastid	67.34	44.84
Zm00001d044995_P001	Maize	plastid	66.33	44.67
Zm00001d037112_P001	Maize	plastid	66.33	44.37
EER89389	Sorghum	cytosol	67.0	44.22
HORVU5Hr1G061810.2	Barley	plastid	64.31	44.11
TraesCS5B01G208600.1	Wheat	plastid	65.32	44.09
HORVU3Hr1G051820.4	Barley	plastid	64.31	43.91
HORVU5Hr1G061760.2	Barley	plastid	65.66	43.82
TraesCS5A01G210300.1	Wheat	plastid	65.66	43.62
TraesCS5B01G208200.1	Wheat	cytosol, plastid	65.32	43.6
TraesCS5D01G216400.1	Wheat	cytosol, plastid	65.32	43.5
TraesCS5A01G210200.1	Wheat	plastid	65.32	43.5
GSMUA_Achr7P21830_001	Banana	cytosol	60.61	43.48
TraesCS7B01G069100.1	Wheat	cytosol	59.93	43.31
TraesCS5D01G216800.1	Wheat	plastid	65.99	43.27
TraesCS5B01G208300.1	Wheat	cytosol	64.65	43.05
TraesCS5A01G215200.1	Wheat	plastid	65.66	43.05
HORVU5Hr1G061850.11	Barley	plastid	65.66	42.76
TraesCS5D01G216600.1	Wheat	plastid	64.31	42.54
TraesCS5B01G208400.1	Wheat	plastid	62.96	42.4
TraesCS5B01G208500.1	Wheat	plastid	64.98	42.32
Os02t0777800-01	Rice	plasma membrane	25.59	42.22
GSMUA_Achr3P19770_001	Banana	plastid	42.42	42.14
Os09t0442100-01	Rice	plastid	64.65	41.92
TraesCS6B01G367100.1	Wheat	plastid	64.65	41.65
HORVU3Hr1G051830.5	Barley	plastid	65.66	41.58
TraesCS5A01G215400.1	Wheat	plastid	63.64	41.54
Zm00001d020631_P001	Maize	plastid	63.97	41.39
TraesCS6A01G336600.1	Wheat	mitochondrion	64.65	41.2
EER98978	Sorghum	plastid	63.64	40.56
GSMUA_Achr7P27200_001	Banana	cytosol, plastid	54.21	40.55
GSMUA_Achr3P15000_001	Banana	cytosol	31.65	40.0
Os08t0457400-01	Rice	plasma membrane	64.31	39.96
Zm00001d032069_P001	Maize	cytosol, plastid	62.96	39.37
EES13968	Sorghum	plastid	63.3	39.33
HORVU5Hr1G061820.6	Barley	plasma membrane	65.32	38.57
TraesCS1D01G091600.1	Wheat	plastid	61.28	38.4
KXG25279	Sorghum	plastid	62.96	38.24
TraesCS1A01G110000.1	Wheat	plastid	61.28	38.16
HORVU6Hr1G081330.2	Barley	nucleus, plastid	64.31	38.05
GSMUA_Achr3P14980_001	Banana	cytosol	15.82	37.9
HORVU0Hr1G012130.1	Barley	cytosol	29.97	37.71
GSMUA_Achr4P09620_001	Banana	cytosol	53.54	37.5
GSMUA_Achr7P04920_001	Banana	cytosol	54.55	36.16
TraesCS1B01G109400.1	Wheat	mitochondrion, plastid	61.28	33.52
GSMUA_Achr11P...	Banana	cytosol	60.27	33.09
HORVU1Hr1G019770.1	Barley	cytosol	61.28	29.21
GSMUA_Achr3P19780_001	Banana	cytosol, extracellular, nucleus	13.47	28.17
GSMUA_Achr3P27770_001	Banana	cytosol	54.55	19.64
GSMUA_Achr5P09740_001	Banana	cytosol	15.49	18.78

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G24670_001
EnsemblPlants:GSMUA_Achr5P24670_001	EnsemblPlants:GSMUA_Achr5T24670_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T1E2	PFAM:PF07714
PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF123	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002958813	SEG:seg	:

Description

Protein kinase APK1B, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G24670_001]

Coordinates

chr5:+:25984026..25986063

Molecular Weight (calculated)

32823.3 Da

IEP (calculated)

9.372

GRAVY (calculated)

-0.302

Length

297 amino acids

Sequence
(BLAST)

001: MTNVIGSGGF GPVYKGFIDD NLRPGLLAQH VAVKSLDLEG LQGHREWLAE VIFLGQLRHP HLVRLIGYCC EDEQRMLVYE YMARGSLENH LFKSKQSLEA
101: RVGLLASLPW STRIKIAVGA AKGLAFLHEA EKPVIYRDFK ASNILLDSDY TAKLSDFGLA KNGPQGDDTH VTTRVMGTHG YAAPEYVMTG HLTAKSDVYS
201: FGVVLLELLS GRRSYSTDGA RKAAAVAYRC LSLSLKTRPN MRAVVEALEP ETAPAAKWRG SRHDHLGATD HSMANFNRDS GLHKKSPKHQ QSSSYWN

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.