CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044995_P001	Maize	plastid	90.22	92.06
Zm00001d037112_P001	Maize	plastid	89.33	90.54
Os06t0202900-01	Rice	cytosol, plasma membrane	79.56	84.04
TraesCS7A01G163300.1	Wheat	cytosol	75.33	79.21
TraesCS7D01G165300.1	Wheat	cytosol	76.0	79.17
TraesCS7B01G069100.1	Wheat	cytosol	68.89	75.43
OQU91855	Sorghum	cytosol	47.78	71.67
GSMUA_Achr5P24670_001	Banana	cytosol	44.22	67.0
OQU85819	Sorghum	plastid	66.0	66.59
GSMUA_Achr10P...	Banana	cytosol	45.11	61.7
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	56.0	57.4
GSMUA_Achr8P22630_001	Banana	mitochondrion	49.33	56.49
OQU90248	Sorghum	mitochondrion	54.67	56.04
GSMUA_Achr7P02350_001	Banana	cytosol	49.56	53.86
EER95470	Sorghum	plastid	44.67	53.32
EES09159	Sorghum	cytosol	47.78	52.44
EES15612	Sorghum	cytosol	47.78	52.44
EER98978	Sorghum	plastid	54.22	52.36
EES13968	Sorghum	plastid	54.67	51.46
KXG40053	Sorghum	cytosol	53.33	51.17
KXG25279	Sorghum	plastid	54.67	50.31
EER91583	Sorghum	plastid	42.22	49.61
OQU92552	Sorghum	plastid	46.44	47.83
KXG20794	Sorghum	plastid	39.56	46.6
EER92149	Sorghum	plastid	49.33	46.15
KXG20556	Sorghum	cytosol	44.22	42.7

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8077318	UniProt:C5Z6B5	EnsemblPlants:EER89389
ProteinID:EER89389	ProteinID:EER89389.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF179	InterPro:Prot_kinase_dom
EnsemblPlantsGene:SORBI_3010G076600	SUPFAM:SSF56112	unigene:Sbi.8834	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A897E2
RefSeq:XP_002438022.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:6296767..6299531

Molecular Weight (calculated)

49528.1 Da

IEP (calculated)

8.948

GRAVY (calculated)

-0.357

Length

450 amino acids

Sequence
(BLAST)

001: MGLRERLLGC FGAGGHHQEQ EQESAARPAA SRRPGGKPTL RRLSTANLRS LSLQDLSRKL ETTKLHAFTL DELKAATKNF STSNFLGEGG FGPVYKGFVD
101: GRLRPGLQPQ HVAVKYLDSD GVQGHREWLA EVVYLGMLSH PHLVKLVGFC NQDDHRMLVY EYMPRQSLEN HLFKNLLASL PWSTRLKIAV GAAKGLAFLH
201: EAETPVIYRD FKASNILLDS DYTAKLSDFG LAKEGPQGDA THVTTRVMGT HGYAAPEYIL TGHLTAKSDV YSFGVVLLEL LTGRRSVDKR RGRREQNLVD
301: WARPYLRRAD RLHRFMDPSL EMQYSATAAE KAAKVAHQCL QSVPKARPNM RDVVDALEPL LALDDDVPMG PFVFTVGAAE AATATAQVVE DAVAVTVAND
401: DQVEAEAEAE AGSRQGKRHV MSAVHAESPL RSRYASAVKR PESPPTLSRA

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.