CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 3
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029468_P002	Maize	plastid	88.77	90.47
TraesCS7B01G376400.1	Wheat	mitochondrion, peroxisome	65.28	70.88
TraesCS7D01G461900.1	Wheat	mitochondrion, peroxisome	65.7	70.54
HORVU7Hr1G108150.1	Barley	mitochondrion, peroxisome	64.86	69.96
OQU90248	Sorghum	mitochondrion	62.79	68.79
OQU91855	Sorghum	cytosol	42.41	68.0
Os03t0407900-01	Rice	cytosol	68.19	65.6
GSMUA_Achr3P02100_001	Banana	plastid	48.65	59.85
KXG40053	Sorghum	cytosol	49.69	50.96
EER98978	Sorghum	plastid	48.02	49.57
OQU85819	Sorghum	plastid	45.95	49.55
EER89389	Sorghum	cytosol	46.15	49.33
EES15612	Sorghum	cytosol	41.37	48.54
EES09159	Sorghum	cytosol	41.16	48.29
EER95470	Sorghum	plastid	37.84	48.28
EER91583	Sorghum	plastid	37.84	47.52
KXG20794	Sorghum	plastid	37.01	46.6
EES13968	Sorghum	plastid	45.74	46.03
KXG25279	Sorghum	plastid	45.32	44.58
OQU92552	Sorghum	plastid	39.71	43.71
KXG20556	Sorghum	cytosol	40.54	41.85

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8077059	UniProt:C5WWP1	EnsemblPlants:EER92149
ProteinID:EER92149	ProteinID:EER92149.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF111	InterPro:Prot_kinase_dom
EnsemblPlantsGene:SORBI_3001G341600	SUPFAM:SSF56112	unigene:Sbi.14699	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A82169
RefSeq:XP_002465151.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:62899008..62904718

Molecular Weight (calculated)

52648.5 Da

IEP (calculated)

10.150

GRAVY (calculated)

-0.541

Length

481 amino acids

Sequence
(BLAST)

001: MARSSSKKKS QQLKQKPVSA WQFLFRGCLG GAAAGSRRNK VQPRSTTPQG RAPSPAPSSF PSPSPATTTG LQHQRLSLTD VMSVASDQDL SVSLVGSNLQ
101: VFTVGELKTA TQGFVDSNFL GEGGFGPVYR GAVAEGAKPG LRAQQIAVKL WDPEGTQGHK EWLSEVIFLG QLRHRNLVKL VGYCSEEEHR LLVYEYMPKG
201: SLENHLFKKF PPVLSWATRL NIAVGAARGL AFLHNHEKPV IYRDFKTSNI LLDPDYEAKL SDFGLAKDGP EGDDTHVSTR VMGTHGYAAP EYILTGHLTA
301: KSDVYSFGVV LLEILSGRRA VDKARPSREQ HLVEHMRGWL KDPHRLARVM DPALEGKYPA AAAHRAAMVA YQCLSGSPKN RPDMSRVVQD LEPLLTATDD
401: DVPAAACVDE AARKERTTRR SDGGGGDRRE RDKARRHEKA AAAAPRSPNP KRAVRRRAPG QSEEFWEWHM PTAAGAGQGK A

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.