CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027892_P001	Maize	plastid	85.71	90.13
Os03t0179400-01	Rice	plasma membrane	74.41	82.12
OQU91855	Sorghum	cytosol	52.45	82.0
TraesCS4A01G010000.1	Wheat	mitochondrion, plastid	71.43	77.19
TraesCS4B01G294300.1	Wheat	mitochondrion, plastid	71.86	76.94
TraesCS4D01G293200.1	Wheat	mitochondrion, plastid	71.64	76.36
OQU90248	Sorghum	mitochondrion	53.73	57.4
OQU85819	Sorghum	plastid	51.81	54.48
EER89389	Sorghum	cytosol	51.17	53.33
EER98978	Sorghum	plastid	52.88	53.22
EES15612	Sorghum	cytosol	46.27	52.93
EES09159	Sorghum	cytosol	46.06	52.68
EER95470	Sorghum	plastid	40.72	50.66
EES13968	Sorghum	plastid	51.6	50.63
KXG25279	Sorghum	plastid	51.81	49.69
EER92149	Sorghum	plastid	50.96	49.69
OQU92552	Sorghum	plastid	45.2	48.51
KXG20794	Sorghum	plastid	39.23	48.17
EER91583	Sorghum	plastid	39.02	47.78
KXG20556	Sorghum	cytosol	42.86	43.13

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	UniProt:A0A1B6QQ83	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	EnsemblPlants:KXG40053	ProteinID:KXG40053	ProteinID:KXG40053.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF72	InterPro:Prot_kinase_dom	EnsemblPlantsGene:SORBI_3001G483600
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00081ACE21	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:75482435..75487790

Molecular Weight (calculated)

50552.5 Da

IEP (calculated)

9.897

GRAVY (calculated)

-0.356

Length

469 amino acids

Sequence
(BLAST)

001: MRPAKAAGGK VSNIAESRLE RPTDPAGMAA RPAGCGSLFG CFGSSSSSSH ENGGSTKKKG GKKKKKKSKQ QQKVAAGSGS GRPRSLQSRM SFNELSLSGM
101: VSPEDLSLSL VGSNLHVFTI ADLRAVTRDF SMTNFIGEGG FGPVYKGYVD DKTKPGLAAQ TVAVKLLDLE GGQGHTEWLT EVFFLGQLRH PHLVKLIGYC
201: YEDEHRLLVY EFMTRGSLEK HLFKKYAASL PWSTRLKIAI GAAKGLAFLH EAEKPVIYRD FKTSNILLDS DYKAKLSDFG LAKDGPEDDE THVSTRVMGT
301: QGYAAPEYIM TGHLTAKSDV YGFGVVLLEL LSGRKAVDKT RPAREQSLVE WARPYLTDAR RLDRVVMDPN LAGQYSARAA HRAAAVAHQC VALNPKSRPH
401: MSAVVDALEP LLALDDCGIV GPFVYVAPPE TVTKGDEAAV GNKRGSGRRG GRRRSSGEGG AAAVVRPEE

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.