CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022126_P001	Maize	mitochondrion	92.71	88.67
TraesCS2A01G170600.1	Wheat	cytosol	79.5	77.56
TraesCS2D01G178100.1	Wheat	cytosol	79.04	76.94
Os07t0613500-01	Rice	plasma membrane	82.46	76.86
TraesCS2B01G197000.1	Wheat	cytosol	78.82	76.72
OQU91855	Sorghum	cytosol	49.43	72.33
EER92149	Sorghum	plastid	68.79	62.79
GSMUA_Achr3P02100_001	Banana	plastid	54.9	61.64
EER89389	Sorghum	cytosol	56.04	54.67
KXG40053	Sorghum	cytosol	57.4	53.73
OQU85819	Sorghum	plastid	53.99	53.14
EER98978	Sorghum	plastid	55.35	52.15
EES15612	Sorghum	cytosol	48.52	51.95
EES09159	Sorghum	cytosol	48.29	51.71
EER95470	Sorghum	plastid	44.19	51.46
EES13968	Sorghum	plastid	54.67	50.21
EER91583	Sorghum	plastid	43.74	50.13
KXG25279	Sorghum	plastid	54.44	48.88
KXG20794	Sorghum	plastid	42.14	48.43
OQU92552	Sorghum	plastid	48.06	48.28
KXG20556	Sorghum	cytosol	48.06	45.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8060676	UniProt:C5XE00	ProteinID:EER97529.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU90248	ProteinID:OQU90248	ProteinID:OQU90248.1
PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF498
InterPro:Prot_kinase_dom	EnsemblPlantsGene:SORBI_3002G372800	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A838C5
RefSeq:XP_002461008.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:73097452..73102265

Molecular Weight (calculated)

47824.3 Da

IEP (calculated)

9.774

GRAVY (calculated)

-0.354

Length

439 amino acids

Sequence
(BLAST)

001: MRTRKSKTTS AWRSFLGGCL GFGGGGRGRA AGDRQRKVRP GGGGGGRLSF TDLSGAADQD LSVSLVGSNL HVFSVAELRE ATRGFVSGNF LGEGGFGPVY
101: KGFVDDGVKK GLKPQAIAVK LWDPEGAQGH KEWLAEVIFL GQLRHPNLVK LVGYCCEDEN RLLVYEYMEH GSLENHLFKQ IPAVLPWSTR LNIAVGAAKG
201: LAFLHNAEKP VIYRDFKASN ILLDSDYKAK LSDFGLAKDG PEGDDTHVST RVMGTHGYAA PEYIMTGHLT AKSDVYSFGV VLLEILTGRR SVDKTRPSRE
301: QNLVDYARPC LKDPLRLARI MDPAMEGQYS ARAAQSAALV AYRCLSSSPK NRPDMSAVVQ ALEPLLDLND DVPVGPVGPV VLFVAAAEAE EKKERAPRKD
401: VRRRRPMSSP KASASPRKRP GAGPKEEFWV WHLPAEQKA

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.