Factsheet for Os07t0613500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90248	Sorghum	mitochondrion	76.86	82.46
Zm00001d022126_P001	Maize	mitochondrion	76.65	78.65
TraesCS2A01G170600.1	Wheat	cytosol	73.89	77.33
TraesCS2D01G178100.1	Wheat	cytosol	73.67	76.94
TraesCS2B01G197000.1	Wheat	cytosol	73.25	76.5
Os10t0395000-01	Rice	plasma membrane	51.59	62.47
GSMUA_Achr3P02100_001	Banana	plastid	51.59	62.15
Os03t0407900-01	Rice	cytosol	64.97	61.2
Os03t0179400-01	Rice	plasma membrane	53.5	59.29
Os06t0202900-01	Rice	cytosol, plasma membrane	50.96	56.34
Os12t0121100-01	Rice	cytosol	43.52	54.67
Os03t0159100-01	Rice	plasma membrane	41.19	51.6
Os09t0442100-01	Rice	plastid	49.68	51.09
Os11t0121400-01	Rice	cytosol, plasma membrane	44.37	50.61
Os05t0591800-00	Rice	cytosol	27.39	49.81
Os10t0431900-01	Rice	plasma membrane	39.7	49.21
Os02t0777800-01	Rice	plasma membrane	18.68	48.89
Os03t0364400-01	Rice	plasma membrane	46.28	48.77
Os08t0457400-01	Rice	plasma membrane	48.2	47.49
Os06t0703000-01	Rice	plasma membrane	39.28	46.02
Os06t0663200-01	Rice	cytosol, plasma membrane	43.52	43.71
Os11t0122150-00	Rice	cytosol	7.01	32.67
Os11t0121500-01	Rice	cytosol	7.22	23.45

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:4343886	EMBL:AK071281	ProteinID:BAC80085.1
ProteinID:BAF22170.1	ProteinID:BAT02625.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EnsemblPlantsGene:Os07g0613500	EnsemblPlants:Os07t0613500-01	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF498	InterPro:Prot_kinase_dom	UniProt:Q8H3A6	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00001B3B34	RefSeq:XP_015647254.1	SEG:seg	:

Description

Similar to Protein kinase APK1B, chloroplast precursor (EC 2.7.1.-). (Os07t0613500-01)

Coordinates

chr7:+:25255066..25259961

Molecular Weight (calculated)

51253.2 Da

IEP (calculated)

9.244

GRAVY (calculated)

-0.359

Length

471 amino acids

Sequence
(BLAST)

001: MRSSSDCKVV AAAARKKEKE AAAWPWSLWG FLLTGCLGGG GGGGKKKSGG KKVRPRGGGG GGLRRLSFTD LTGAADQDLS VSLVGSNLHV FTVAELRDAT
101: RGFVSGNFLG EGGFGPVYKG LVGDGVKPGL RPQAIAVKLW DPEGAQGHKE WLAEVIFLGQ LRHPNLVKLV GYCCEDENRL LVYEYMEHGS LENHLFKQIP
201: AVLPWSTRLN IAVGAAKGLA FLHDAEKPVI YRDFKASNIL LDSDYKAKLS DFGLAKDGPE GDDTHVSTRV MGTHGYAAPE YIMTGHLTAK SDVYSFGVVL
301: LEILTGRRAV DKTRPNREQS LVEYARPCLR DPLRLIRIMD PALEGRYSPA AAREAAAVAY RCLSGSPKNR PDMSAVVDAL EPLLVATDDV PLGPVVLFVA
401: PDQEADAAAA ADDDEDDKAR RRQRRTRKDE QHRRRSRLRT SPKGSPRKPA VAAACRNEEF WVWHVPADHK A

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.