Factsheet for GSMUA_Achr3P02100_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 2
nucleus 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P11420_001	Banana	mitochondrion	66.75	72.91
GSMUA_Achr5P24670_001	Banana	cytosol	46.04	60.61
GSMUA_Achr10P...	Banana	cytosol	50.9	60.49
GSMUA_Achr8P22630_001	Banana	mitochondrion	56.78	56.49
GSMUA_Achr7P02350_001	Banana	cytosol	58.57	55.31
OQU90248	Sorghum	mitochondrion	61.64	54.9
HORVU7Hr1G108150.1	Barley	mitochondrion, peroxisome	62.4	54.71
TraesCS7B01G376400.1	Wheat	mitochondrion, peroxisome	61.64	54.4
TraesCS7D01G461900.1	Wheat	mitochondrion, peroxisome	62.15	54.24
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	60.1	53.53
GSMUA_Achr8P26730_001	Banana	cytosol	45.27	53.47
TraesCS2D01G178100.1	Wheat	cytosol	61.13	52.99
TraesCS2B01G197000.1	Wheat	cytosol	61.13	52.99
TraesCS2A01G170600.1	Wheat	cytosol	60.87	52.89
Zm00001d022126_P001	Maize	mitochondrion	61.89	52.72
GSMUA_Achr1P26800_001	Banana	mitochondrion	44.25	52.58
GSMUA_Achr2P17920_001	Banana	cytosol	51.15	52.36
Os07t0613500-01	Rice	plasma membrane	62.15	51.59
GSMUA_Achr10P...	Banana	cytosol	50.64	50.64
GSMUA_Achr7P19720_001	Banana	cytosol	43.73	49.85
GSMUA_Achr6P22050_001	Banana	plastid	44.5	49.57
GSMUA_Achr10P...	Banana	cytosol	42.46	49.55
Zm00001d029468_P002	Maize	plastid	59.59	49.36
EER92149	Sorghum	plastid	59.85	48.65
Os03t0407900-01	Rice	cytosol	61.38	48.0
GSMUA_Achr7P21830_001	Banana	cytosol	50.38	47.58
GSMUA_Achr3P14980_001	Banana	cytosol	14.32	45.16
GSMUA_Achr3P15000_001	Banana	cytosol	27.11	45.11
GSMUA_Achr3P19770_001	Banana	plastid	33.76	44.15
GSMUA_Achr7P27200_001	Banana	cytosol, plastid	43.48	42.82
GSMUA_Achr7P04920_001	Banana	cytosol	47.31	41.29
GSMUA_Achr4P09620_001	Banana	cytosol	44.5	41.04
GSMUA_Achr11P...	Banana	cytosol	50.9	36.78
GSMUA_Achr3P19780_001	Banana	cytosol, extracellular, nucleus	11.76	32.39
GSMUA_Achr5P09740_001	Banana	cytosol	15.35	24.49
GSMUA_Achr3P27770_001	Banana	cytosol	49.1	23.27
TraesCS2D01G124300.1	Wheat	plastid	39.64	22.08
TraesCS2B01G143400.1	Wheat	plastid	39.39	21.97
TraesCS2D01G123700.1	Wheat	mitochondrion, plastid	39.39	21.88

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G02100_001
EnsemblPlants:GSMUA_Achr3P02100_001	EnsemblPlants:GSMUA_Achr3T02100_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SB28	PFAM:PF07714
PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF123	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029688B3	:	:

Description

Protein kinase APK1A, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G02100_001]

Coordinates

chr3:+:1402781..1405386

Molecular Weight (calculated)

43300.3 Da

IEP (calculated)

9.215

GRAVY (calculated)

-0.306

Length

391 amino acids

Sequence
(BLAST)

001: MSKASLWSLL LPGCYGSGHK KRSKKQIPIQ RLSFSDVSSS TGVLSPEDLS ISLVGSNLYV FTLAELKEAT QSFSVGNFLG EGGFGPVYRG FVDEKVKPGL
101: KSQPVAVKLL DLDGGQGHKE WLAEVLVLGR LRHPHLVKLI GYCCEEEHRL LVYEFMPRGS LENHLFKRYY TPLPWLARLR IAVGAAKGLG FLHDSDKPVI
201: YRDFKASNIL LDSDYKARLS DFGLAKDGPE GDDTHVSTRV MGTHGYAAPE YIMTGHLTAK SDVYSFGVVL LELLTGRRCV DKARPSREQN LCLSQSPKSR
301: PHMSAIVEAL EPLLDMNDVL LGTFVYVAPV AENGSEEGTE TVGMKENGLR RQGHMHKLRS PKPGKLSDVL CREVGSRVRR NSPMHHKKND T

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.