Factsheet for GSMUA_Achr3P27770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P19720_001	Banana	cytosol	26.79	64.43
KRH41391	Soybean	cytosol	28.48	62.01
KRH60107	Soybean	cytosol	28.48	62.01
KXG20556	Sorghum	cytosol	34.91	61.8
GSMUA_Achr10P...	Banana	cytosol	24.97	61.49
Zm00001d046939_P001	Maize	cytosol	34.79	61.46
Os06t0663200-01	Rice	cytosol, plasma membrane	34.42	60.55
TraesCS7D01G474600.1	Wheat	cytosol	34.79	60.17
TraesCS7B01G391200.1	Wheat	cytosol	34.79	60.17
TraesCS7A01G487900.1	Wheat	cytosol	34.79	59.92
PGSC0003DMT400007503	Potato	cytosol	26.42	58.13
Solyc12g009310.1.1	Tomato	cytosol	26.3	57.87
GSMUA_Achr8P26730_001	Banana	cytosol	22.79	56.8
GSMUA_Achr1P26800_001	Banana	mitochondrion	22.42	56.23
VIT_11s0065g00470.t01	Wine grape	cytosol	30.79	55.7
GSMUA_Achr7P04920_001	Banana	cytosol	30.18	55.58
PGSC0003DMT400035255	Potato	cytosol	29.33	54.75
HORVU7Hr1G109590.5	Barley	plasma membrane	34.42	54.72
GSMUA_Achr5P24670_001	Banana	cytosol	19.64	54.55
Solyc07g042590.2.1	Tomato	cytosol	29.21	54.52
Zm00001d036656_P003	Maize	cytosol	32.24	54.18
AT2G07180.1	Thale cress	cytosol	28.97	54.07
CDX86877	Canola	plastid	28.48	54.02
GSMUA_Achr10P...	Banana	cytosol	25.33	53.45
CDY66556	Canola	plastid	28.48	53.41
GSMUA_Achr6P22050_001	Banana	plastid	22.55	52.99
CDX94273	Canola	cytosol	28.24	52.36
GSMUA_Achr7P11420_001	Banana	mitochondrion	22.67	52.23
CDY41127	Canola	cytosol	28.12	52.13
GSMUA_Achr10P...	Banana	cytosol	20.73	51.98
GSMUA_Achr4P09620_001	Banana	cytosol	26.55	51.65
Bra037903.1-P	Field mustard	plastid	28.48	51.54
Bra033198.1-P	Field mustard	cytosol	27.76	51.46
GSMUA_Achr7P21830_001	Banana	cytosol	25.33	50.48
GSMUA_Achr3P02100_001	Banana	plastid	23.27	49.1
GSMUA_Achr7P27200_001	Banana	cytosol, plastid	23.27	48.36
CDY68998	Canola	cytosol	13.58	47.86
GSMUA_Achr2P17920_001	Banana	cytosol	21.7	46.86
GSMUA_Achr3P15000_001	Banana	cytosol	13.33	46.81
GSMUA_Achr8P22630_001	Banana	mitochondrion	22.18	46.56
GSMUA_Achr3P19770_001	Banana	plastid	16.61	45.82
GSMUA_Achr3P14980_001	Banana	cytosol	6.79	45.16
GSMUA_Achr7P02350_001	Banana	cytosol	22.42	44.69
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	23.03	43.28
GSMUA_Achr11P...	Banana	cytosol	26.18	39.93
GSMUA_Achr3P19780_001	Banana	cytosol, extracellular, nucleus	5.58	32.39
GSMUA_Achr5P09740_001	Banana	cytosol	6.3	21.22

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:16.6.3.1	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	Gene3D:3.30.70.580	Gene3D:3.30.70.660	GO:GO:0000166
GO:GO:0001522	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009982	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G27770_001	EnsemblPlants:GSMUA_Achr3P27770_001	EnsemblPlants:GSMUA_Achr3T27770_001
InterPro:IPR000719	InterPro:IPR020095	InterPro:Kinase-like_dom_sf	UniProt:M0SIE3	PFAM:PF00069	PFAM:PF01416
PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF190
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:PsdUridine_synth_TruA_C	InterPro:PsdUridine_synth_TruA_a/b_dom	InterPro:PsdUridine_synth_cat_dom_sf	InterPro:SRK-like_kinase
SUPFAM:SSF55120	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294E558	SEG:seg	:

Description

protein kinase APK1B, chloroplast precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G27770_001]

Coordinates

chr3:-:27252004..27266684

Molecular Weight (calculated)

92144.2 Da

IEP (calculated)

6.755

GRAVY (calculated)

-0.482

Length

825 amino acids

Sequence
(BLAST)

001: MGACMSLEEQ IEIGKATASL YPDENNDTSQ NNVISALAPP KDVDDLRLIS GYGNVNIFTY SELRAATKNF RPDQVLGEGG FGVVYKGVID ESVRPGSETI
101: QVAVKELKSD GLQGDKEWLA EVNYLGQLSH PNLVKLIGYC CEGDHRLLVY EYMASGSLDK HLFRRVCLTM PWSTRMKIAL GAAKGLAFLH AAERSIIYRD
201: FKTSNILLDE DYDAKLSDFG LAKEGPTGDQ THVSTRVVGT YGYAAPEYIM TGHLTARSDV YGFGVVLLEM LLGRRAMDKS RPSRHQNLVD LAYRCLSQNP
301: KGRPTMNQVV ESLESLQDLP ENWEGILFQS SEAAVTLYEA PKEIASDHLE KNSSENGENG SNVHAKGRKK LGNGRSNSEP PPVEFSQYSP SPESERHEPI
401: ESRHRWRRAP RFTSTTTTPT LVASPDGPPG RVSNICTHGR GRKWWISMRI WFAAGMGLPR CVACFPPSAG VTMETPCGCE ETETSTEPSK HRTGRWKRLT
501: FKIVLSYHGG TFDGWQKQPG LHTVQGIVEH FLGRFVDENK AKQLKEKSMP VEGCAVVAGR TDKGVTALQQ VCSFYTWRKD VKCEDIKDTI NKAVPGKLRA
601: LHVAEVGRVF HPNFAAKWRR YFYILPLNDN EESIISSSES DWTRTSDGEE DDQINRLPEG DEKEQQQTFS HVNEDDSPDI VGLKRRSFSV SKVDQLLREL
701: EGKTLSYKMF ARDTKASRSI GPPTECFMFH ARAAETKLPS DTEDYAYLQR VMCVELVANR FLRKMVRVLV ATAIREAAAG ADDDALIKLM DATCRRATAP
801: PAPPDGLCLV NVGYEEFKQE FCFIR

Best Arabidopsis Sequence Match ( AT5G35400.1 )
(BLAST)

001: MASRVYVHYH HADACSKARW NARETFRFMY DRPWQHVLDF YSNAVEGNLS VLSLFQPKKS LVHDDGITEE MLLESEPETS TRKDGRSGRW ERVNFKIVLS
101: YNGASFDGWQ KQPDLHTVQG VVEKSLGGFV DERKAQLLKK KCKPLEGRVL VAGRTDKGVS ALNQVCSFYT WRKDIEPIAI EDAINKDASG KLRVVSISKV
201: SRSFHPNFSA KWRRYLYIFP LDDAEPLRKS GENHENFIFD ENKKKQRNGL LSEEIAEEVI MSEDDELEIE ETSNALEVVE KPSDFSVSKV DQLLQHLQGK
301: VLSYKMFARD TKAARNEGPP TECFMYHARA AEIRLSSSDC VEGRRVMCVE LVANRFLRKM VRVLVATSIR EAAAGAEDDA LLKLLEASCR RATAPPAPSE
401: GLCLFDVGYT DFDPQTSLIS

Arabidopsis Description

tRNA pseudouridine synthase [Source:UniProtKB/TrEMBL;Acc:F4JZU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.