Factsheet for GSMUA_Achr5P09740_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20019	Canola	cytosol	60.0	69.67
GSMUA_Achr3P19780_001	Banana	cytosol, extracellular, nucleus	29.39	50.7
GSMUA_Achr3P14980_001	Banana	cytosol	22.86	45.16
KRG93514	Soybean	cytosol	26.94	27.16
KRG93513	Soybean	plastid	31.02	19.24
GSMUA_Achr10P...	Banana	cytosol	25.71	18.81
KRG93548	Soybean	cytosol	33.47	18.3
GSMUA_Achr7P19720_001	Banana	cytosol	25.31	18.08
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	31.84	17.77
GSMUA_Achr7P21830_001	Banana	cytosol	29.8	17.63
GSMUA_Achr10P...	Banana	cytosol	26.94	16.88
GSMUA_Achr7P11420_001	Banana	mitochondrion	24.49	16.76
GSMUA_Achr2P17920_001	Banana	cytosol	25.31	16.23
GSMUA_Achr6P22050_001	Banana	plastid	22.86	15.95
GSMUA_Achr1P26800_001	Banana	mitochondrion	21.22	15.81
GSMUA_Achr8P26730_001	Banana	cytosol	21.22	15.71
GSMUA_Achr7P04920_001	Banana	cytosol	28.57	15.62
GSMUA_Achr5P24670_001	Banana	cytosol	18.78	15.49
GSMUA_Achr3P02100_001	Banana	plastid	24.49	15.35
GSMUA_Achr10P...	Banana	cytosol	20.41	15.2
GSMUA_Achr7P27200_001	Banana	cytosol, plastid	24.49	15.11
GSMUA_Achr4P09620_001	Banana	cytosol	25.71	14.86
GSMUA_Achr8P22630_001	Banana	mitochondrion	23.27	14.5
GSMUA_Achr7P02350_001	Banana	cytosol	24.08	14.25
GSMUA_Achr11P...	Banana	cytosol	30.61	13.86
Os05t0591800-00	Rice	cytosol	7.35	6.95
GSMUA_Achr3P27770_001	Banana	cytosol	21.22	6.3
GSMUA_Achr3P19770_001	Banana	plastid	3.67	3.01
GSMUA_Achr3P15000_001	Banana	cytosol	2.86	2.98

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G09740_001	EnsemblPlants:GSMUA_Achr5P09740_001
EnsemblPlants:GSMUA_Achr5T09740_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SX53	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF507	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002950E0A	:	:	:	:

Description

Protein kinase APK1B, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G09740_001]

Coordinates

chr5:-:6962876..6965465

Molecular Weight (calculated)

27342.7 Da

IEP (calculated)

10.231

GRAVY (calculated)

-0.616

Length

245 amino acids

Sequence
(BLAST)

001: MKIALGAAKG LAFLHEEAER PVIYRDFKSS NVLLDVDYNA KLSDFGLAKD APDGDKTHVS TRVMGTYGYA APEYVMTGHL TSKSDVYSYG VVLLEMMTGR
101: RSMDKNRPNG EHNLVEWARP NLRERRRFYR LIDPRLEGNF SIKGAQKASQ LAHACLSRDP KARPLMSEVV EVLKPLINLK DMASSSYFFQ TMQTERTMAH
201: SNSVGARNGM KPQGSFGRNG QPPTRSLSHG AHASPYHQSP KPNAR

Best Arabidopsis Sequence Match ( AT3G01300.1 )
(BLAST)

001: MGFDSVKVME NWQSKTSNEN EKKKKKRRRK KNNNVRNSEH YEEEANGCWV KFRYIVCCAS STSDVETSLT LSTSTVGSQS AIVQSNDQPV GPVSSTTTTS
101: NAESSLSTPI ISEELNIYSH LKKFSFIDLK LATRNFRPES LLGEGGFGCV FKGWVEENGT APVKPGTGLT VAVKTLNPDG LQGHKEWLAE INYLGNLLHP
201: NLVKLVGYCI EDDQRLLVYE FMPRGSLENH LFRRSLPLPW SIRMKIALGA AKGLSFLHEE ALKPVIYRDF KTSNILLDGE YNAKLSDFGL AKDAPDEGKT
301: HVSTRVMGTY GYAAPEYVMT GHLTSKSDVY SFGVVLLEML TGRRSMDKNR PNGEHNLVEW ARPHLLDKRR FYRLLDPRLE GHFSVKGAQK VTQLAAQCLS
401: RDSKIRPKMS EVVEVLKPLP HLKDMASASY YFQTMQAERL KAGSGSGSGR GFGSRNGQPV FRTLSSPHGQ AGSSPYRHQI PSPKPKGATT

Arabidopsis Description

Receptor-like serine/threonine-protein kinase At3g01300 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.