Factsheet for GSMUA_Achr1P26800_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26730_001	Banana	cytosol	85.11	84.59
GSMUA_Achr6P22050_001	Banana	plastid	87.84	82.34
VIT_06s0004g00220.t01	Wine grape	mitochondrion, plastid	82.37	71.32
KRH43007	Soybean	cytosol	80.24	69.29
Solyc01g028830.2.1	Tomato	plastid	81.16	69.17
PGSC0003DMT400061697	Potato	cytosol, plastid	81.16	69.17
KRH59124	Soybean	cytosol, mitochondrion	79.64	68.59
GSMUA_Achr3P15000_001	Banana	cytosol	47.42	66.38
AT5G56460.1	Thale cress	cytosol	80.55	64.95
CDY41811	Canola	cytosol	79.94	63.37
CDY20721	Canola	cytosol	79.03	62.65
CDY47750	Canola	cytosol	79.64	62.38
Bra035622.1-P	Field mustard	cytosol	77.2	62.25
CDY32778	Canola	cytosol	79.33	62.0
Bra002815.1-P	Field mustard	endoplasmic reticulum, plasma membrane	45.59	61.73
GSMUA_Achr7P27200_001	Banana	cytosol, plastid	73.56	60.96
GSMUA_Achr3P14980_001	Banana	cytosol	21.58	57.26
GSMUA_Achr5P24670_001	Banana	cytosol	48.94	54.21
GSMUA_Achr7P11420_001	Banana	mitochondrion	55.02	50.56
GSMUA_Achr10P...	Banana	cytosol	50.15	50.15
GSMUA_Achr10P...	Banana	cytosol	59.57	50.13
GSMUA_Achr10P...	Banana	cytosol	48.63	47.76
GSMUA_Achr7P19720_001	Banana	cytosol	49.54	47.52
GSMUA_Achr7P21830_001	Banana	cytosol	59.57	47.34
GSMUA_Achr8P22630_001	Banana	mitochondrion	55.93	46.82
GSMUA_Achr3P19770_001	Banana	plastid	41.03	45.15
GSMUA_Achr2P17920_001	Banana	cytosol	52.28	45.03
GSMUA_Achr7P02350_001	Banana	cytosol	55.93	44.44
GSMUA_Achr3P02100_001	Banana	plastid	52.58	44.25
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	56.84	42.6
GSMUA_Achr4P09620_001	Banana	cytosol	52.58	40.8
GSMUA_Achr7P04920_001	Banana	cytosol	52.89	38.84
GSMUA_Achr11P...	Banana	cytosol	59.88	36.41
GSMUA_Achr3P19780_001	Banana	cytosol, extracellular, nucleus	12.46	28.87
GSMUA_Achr3P27770_001	Banana	cytosol	56.23	22.42
GSMUA_Achr5P09740_001	Banana	cytosol	15.81	21.22

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G26800_001
EnsemblPlants:GSMUA_Achr1P26800_001	EnsemblPlants:GSMUA_Achr1T26800_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0S3D7	PFAM:PF07714
PIRSF:PIRSF000654	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF76	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0002962BAA	SEG:seg	:

Description

tyrosine protein kinase domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G26800_001]

Coordinates

chr1:-:22887845..22892740

Molecular Weight (calculated)

36596.8 Da

IEP (calculated)

6.112

GRAVY (calculated)

-0.198

Length

329 amino acids

Sequence
(BLAST)

001: MGNCWFRGSP SSYRVSSNAK SECQKVENPL VKEEEKEGSK LPSNPEEVED LRGTTATNLL IAFTFDELKA ITGNFRQDYV LGGGGFGSVF KGFVTQDLKE
101: GLQPLQVAVK VHDGDNSFQG HREWLTEVIF LGQLSHPNLV KLVGYCCEDE HRVLIYEFMA RGSVESNLFS RVLLPLPWSI RMKIAFGAAK GLAFLHEAEK
201: PVIFRDFKTS NILLDQDYNA KLSDFGLAKD GPVGDKSHVS TRIMGTYGYA APEYIMTGHL TAMSDVYSFG VVLLEFLTGR KSLDKSRPTA MLAYHCLDRN
301: PKARPLMRDI VESLEPLQEA VEVPISSIS

Best Arabidopsis Sequence Match ( AT5G56460.1 )
(BLAST)

001: MGNCWCRFEP LNHRVSANAK SESPKEQSPT VEDKHIKEVQ KLPSNPKEVE DLRRDSAANP LIAFTYEELK NITSNFRQDR VLGGGGFGSV YKGFIKEDLG
101: DQEVPEPLPV AVKVHDGDNS FQGHREWLAE VIFLGQLSHP NLVKLIGYCC EDNHRVLIYE YMARGSVENN LFSRVLLPLS WAIRMKIAFG AAKGLAFLHE
201: AKKPVIYRDF KTSNILLDMD YNAKLSDFGL AKDGPVGDKS HVSTRIMGTY GYAAPEYIMT GHLTPGSDVY SFGVVLLELL TGRKSLDKSR PTREQNLIDW
301: ALPLLKEKKK VLNIVDPKMN CEYPVKAVQK AAMLAYHCLN RNPKARPLMR DIVDSLEPLQ ATEEEALLVP PVQKAVITII DEMPKNGLKK VEELKKVEEV
401: KKVIEDAC

Arabidopsis Description

PBL16Probable serine/threonine-protein kinase PBL16 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.