Factsheet for GSMUA_Achr4P09620_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P19720_001	Banana	cytosol	60.38	74.64
GSMUA_Achr10P...	Banana	cytosol	56.84	71.94
KRH41391	Soybean	cytosol	56.6	63.32
KRH60107	Soybean	cytosol	56.37	63.06
Solyc12g009310.1.1	Tomato	cytosol	52.59	59.47
PGSC0003DMT400007503	Potato	cytosol	52.59	59.47
KXG20794	Sorghum	plastid	49.76	55.24
TraesCS7A01G416100.1	Wheat	mitochondrion	48.82	54.19
TraesCS7D01G409400.1	Wheat	cytosol	48.58	53.93
TraesCS7B01G316100.1	Wheat	cytosol	48.82	53.63
GSMUA_Achr5P24670_001	Banana	cytosol	37.5	53.54
GSMUA_Achr8P26730_001	Banana	cytosol	41.75	53.47
PGSC0003DMT400035255	Potato	cytosol	55.19	52.94
CDX86877	Canola	plastid	54.01	52.64
VIT_11s0065g00470.t01	Wine grape	cytosol	56.6	52.63
GSMUA_Achr1P26800_001	Banana	mitochondrion	40.8	52.58
GSMUA_Achr3P14980_001	Banana	cytosol	15.33	52.42
Solyc07g042590.2.1	Tomato	cytosol	54.48	52.26
GSMUA_Achr6P22050_001	Banana	plastid	43.16	52.14
CDY41127	Canola	cytosol	54.72	52.13
CDX94273	Canola	cytosol	54.72	52.13
CDY66556	Canola	plastid	54.01	52.05
AT2G07180.1	Thale cress	cytosol	54.25	52.04
GSMUA_Achr10P...	Banana	cytosol	40.09	51.67
Bra033198.1-P	Field mustard	cytosol	53.77	51.24
GSMUA_Achr7P11420_001	Banana	mitochondrion	43.16	51.12
GSMUA_Achr7P04920_001	Banana	cytosol	54.01	51.12
Os06t0703000-01	Rice	plasma membrane	48.35	50.99
Bra037903.1-P	Field mustard	plastid	54.01	50.22
GSMUA_Achr7P27200_001	Banana	cytosol, plastid	46.23	49.37
HORVU7Hr1G096400.1	Barley	peroxisome, plastid	42.45	49.32
GSMUA_Achr7P21830_001	Banana	cytosol	47.88	49.03
GSMUA_Achr10P...	Banana	cytosol	45.05	48.85
CDY68998	Canola	cytosol	26.18	47.44
GSMUA_Achr3P15000_001	Banana	cytosol	26.18	47.23
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	46.93	45.33
GSMUA_Achr2P17920_001	Banana	cytosol	40.33	44.76
GSMUA_Achr3P02100_001	Banana	plastid	41.04	44.5
GSMUA_Achr3P19770_001	Banana	plastid	31.37	44.48
GSMUA_Achr8P22630_001	Banana	mitochondrion	41.04	44.27
GSMUA_Achr7P02350_001	Banana	cytosol	42.92	43.96
Zm00001d014697_P002	Maize	mitochondrion	40.09	41.67
Zm00001d036459_P005	Maize	mitochondrion, plastid	37.74	40.51
GSMUA_Achr11P...	Banana	cytosol	48.58	38.08
GSMUA_Achr3P19780_001	Banana	cytosol, extracellular, nucleus	12.74	38.03
GSMUA_Achr3P27770_001	Banana	cytosol	51.65	26.55
GSMUA_Achr5P09740_001	Banana	cytosol	14.86	25.71

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr4G09620_001	EnsemblPlants:GSMUA_Achr4P09620_001	EnsemblPlants:GSMUA_Achr4T09620_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SMH9
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF190	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294949D

Description

protein kinase APK1B, chloroplast precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G09620_001]

Coordinates

chr4:-:6949858..6955765

Molecular Weight (calculated)

47195.6 Da

IEP (calculated)

7.372

GRAVY (calculated)

-0.425

Length

424 amino acids

Sequence
(BLAST)

001: MGNCVSLRGP LPVSGEETFA NGTSDAARQP PIRDAIDLQE IAGYSNLHTF TYGELRLATD NFRPDKILGQ GGFGLVYKGA IDDNVRPGLE YTLVAVKELN
101: PRGFQGHKEW LAEVNYLGQL SHPNLVKLIG YCCEDEHRLL VYEYMAYGSL EKHLFRRSCA TLPWLTRMKI ALDTAKGLAF LHGAERPIIY RDFKASNILI
201: DAEYNGKLSD FGLAKEGPMG EQTHVSTRVM GTYGYTAPEY ILTGHLTSKS DVYGFGVVLL EMLIGRKAMD PSKRSRQHDL VKWARPLLVR SRKLLKIIDP
301: RLEGQYSNKD VERVARLAYD CLNQNPKMRP VMSEVVDVLQ AMLRKEETIL PHSPEAAMAP PEVGSAVGEQ REAVGHRKGD VALPQVGQED VDGSAVEEEK
401: GEAVEHGKRN SNKGNNLKQY NRGV

Best Arabidopsis Sequence Match ( AT2G07180.2 )
(BLAST)

001: MGICFSAEDQ HYQFSQQQNY PKKTTPGKKA AVYLMKSDCE DVVGKVSGSG SGGGGLPLAP KNIKDLQSNP GYENVDIFTY EEMKIATKQF RPDYILGEGG
101: FGVVYKGVID ESVRVGFKST KVAIKELNPE GFQGDREWLA EVNYLGQLSH PNLVKLIGYC CEDDHRLLVY EYMAMGSLEK HLFRRVGCTL TWTKRMKIAL
201: DAAKGLAFLH GAERSIIYRD LKTANILLDE GYNAKLSDFG LAKDGPRGDQ THVSTRVMGT YGYAAPEYVM TGHLTSRSDV YGFGVLLLEM LLGKRAMDKS
301: RACREHNLVE WARPLLNHNK KLLRIIDPRM DGQYGTKALM KVAGLAYQCL SQNPKGRPLM NHVVEVLETL KDDGDAQEEV MTNLHSRGKS VTLYEASSDS
401: QGTRDGNGQR RRRPESGRSK SEAAVDTEKY VSTLSEPDTT KI

Arabidopsis Description

PBL17Probable serine/threonine-protein kinase PBL17 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.