CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G416100.1	Wheat	mitochondrion	71.99	71.99
TraesCS7B01G316100.1	Wheat	cytosol	72.25	71.5
TraesCS7D01G409400.1	Wheat	cytosol	71.2	71.2
Os06t0703000-01	Rice	plasma membrane	74.35	70.65
HORVU7Hr1G096400.1	Barley	peroxisome, plastid	64.4	67.4
Zm00001d036459_P005	Maize	mitochondrion, plastid	67.8	65.57
GSMUA_Achr10P...	Banana	cytosol	56.28	64.18
Zm00001d014697_P002	Maize	mitochondrion	68.06	63.73
GSMUA_Achr7P19720_001	Banana	cytosol	53.66	59.77
KRH60107	Soybean	cytosol	57.07	57.52
OQU91855	Sorghum	cytosol	45.03	57.33
KRH41391	Soybean	cytosol	56.81	57.26
PGSC0003DMT400007503	Potato	cytosol	53.14	54.13
Solyc12g009310.1.1	Tomato	cytosol	52.88	53.87
GSMUA_Achr4P09620_001	Banana	cytosol	55.24	49.76
EER95470	Sorghum	plastid	48.69	49.34
PGSC0003DMT400035255	Potato	cytosol	54.71	47.29
VIT_11s0065g00470.t01	Wine grape	cytosol	56.28	47.15
CDX86877	Canola	plastid	53.66	47.13
Solyc07g042590.2.1	Tomato	cytosol	54.45	47.06
KXG20556	Sorghum	cytosol	57.33	47.0
AT2G07180.1	Thale cress	cytosol	54.19	46.83
CDY66556	Canola	plastid	53.93	46.82
EER91583	Sorghum	plastid	46.86	46.74
EES09159	Sorghum	cytosol	50.0	46.59
EES15612	Sorghum	cytosol	49.74	46.34
CDX94273	Canola	cytosol	52.88	45.39
CDY41127	Canola	cytosol	52.88	45.39
Bra037903.1-P	Field mustard	plastid	53.66	44.96
Bra033198.1-P	Field mustard	cytosol	52.09	44.72
CDY68998	Canola	cytosol	26.7	43.59
OQU90248	Sorghum	mitochondrion	48.43	42.14
OQU92552	Sorghum	plastid	47.38	41.42
OQU85819	Sorghum	plastid	46.34	39.69
EER89389	Sorghum	cytosol	46.6	39.56
EER98978	Sorghum	plastid	47.91	39.27
KXG40053	Sorghum	cytosol	48.17	39.23
EES13968	Sorghum	plastid	48.95	39.12
KXG25279	Sorghum	plastid	48.17	37.63
EER92149	Sorghum	plastid	46.6	37.01

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	UniProt:A0A194YLD0	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KXG20794	ProteinID:KXG20794	ProteinID:KXG20794.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF122	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3010G254100	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0007F22FDD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:59292400..59294322

Molecular Weight (calculated)

42436.4 Da

IEP (calculated)

9.216

GRAVY (calculated)

-0.211

Length

382 amino acids

Sequence
(BLAST)

001: MISNISFLRK MHRWILPSCG DIRQPRQSSS SSRRRDEAPR PAAAPSKLRK VGSEGMLVLA VPKDVEEFRT MSAYGRLKLF TYDELRKATG DFNPGQIVGE
101: GGFGVVYRGV IDGAVRKGYP PTEVAVKVLN PEGLQGDREW LTEVSYLGQY SHPNLVELIG YCCEDDHRLL VYEFMAKGSL EHHLFRRACS LSWTTRLAIA
201: LHVARGLAFL HGPDRPIIYR DFKTSNILLD AEFNAKLSDF GLAKEGPMGG ETHVSTRVMG TYGYAAPEYI ATGHLTVMSD VYGFGVVLLE MLVGRRALEP
301: SRAGAREGSL VDWARPILIR PKKLERILDR RMGEVGSEMG LERVARLAYD CLSQNPKVRP SMARVVTTLE AVLAAADDAP PR

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.