CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014243_P001	Maize	plastid	93.67	72.99
Os10t0395000-01	Rice	plasma membrane	85.0	65.55
TraesCS4D01G231100.1	Wheat	cytosol	82.0	64.91
TraesCS4B01G229700.1	Wheat	plastid	81.67	64.64
TraesCS4A01G073500.1	Wheat	cytosol, plastid	81.67	64.64
HORVU4Hr1G064260.3	Barley	plastid	82.0	62.92
KXG40053	Sorghum	cytosol	82.0	52.45
OQU90248	Sorghum	mitochondrion	72.33	49.43
EES15612	Sorghum	cytosol	66.0	48.29
EES09159	Sorghum	cytosol	65.33	47.8
EER89389	Sorghum	cytosol	71.67	47.78
EER95470	Sorghum	plastid	60.0	47.75
OQU85819	Sorghum	plastid	70.0	47.09
KXG20794	Sorghum	plastid	57.33	45.03
EER91583	Sorghum	plastid	57.0	44.65
OQU92552	Sorghum	plastid	64.0	43.94
EER98978	Sorghum	plastid	68.0	43.78
EER92149	Sorghum	plastid	68.0	42.41
EES13968	Sorghum	plastid	66.0	41.42
KXG25279	Sorghum	plastid	65.67	40.29
KXG20556	Sorghum	cytosol	59.33	38.2

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8062778	UniProt:A0A1Z5S7Y8	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU91855	ProteinID:OQU91855	ProteinID:OQU91855.1
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF72
InterPro:Prot_kinase_dom	EnsemblPlantsGene:SORBI_3001G258000	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A820D3
RefSeq:XP_002464678.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:30557874..30560961

Molecular Weight (calculated)

33457.5 Da

IEP (calculated)

9.544

GRAVY (calculated)

-0.264

Length

300 amino acids

Sequence
(BLAST)

001: MSNFVGEGGF GPVYKGRVDD RVRPGLRQPQ AVAVKLLDLE GSQGHKEWLA EVIFLGQLRH PHLVKLIGYC YQDEHRLLVY EFMARGSLEK HLFKKYTASL
101: PWLTRLKIAI GAAKGLAFLH EATKPVIYRD FKTSNILLDS DYTAKLSDFG LAKDGPGEDE THVSTRVMGT QGYAAPEYIM TGHLTTKSDV YSFGVVLLEL
201: LTGRKAVDKN RPPREQSLVE WARPCLRDAR RLERVMDRRL LHPTPTRAAH KAAGVAHQCL SVSPKSRPQM SAVVEALESL LALDDAAVEP FVYTAPPANR

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.