CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020631_P001	Maize	plastid	92.27	93.68
Os09t0442100-01	Rice	plastid	82.62	84.06
HORVU5Hr1G061810.2	Barley	plastid	77.04	82.91
HORVU3Hr1G051820.4	Barley	plastid	77.04	82.53
TraesCS5B01G208600.1	Wheat	plastid	77.25	81.82
TraesCS5D01G216500.1	Wheat	plastid	47.0	81.72
TraesCS5A01G215200.1	Wheat	plastid	79.4	81.68
TraesCS5A01G210300.1	Wheat	plastid	78.33	81.66
TraesCS5D01G216800.1	Wheat	plastid	78.76	81.02
TraesCS5B01G208400.1	Wheat	plastid	76.39	80.73
TraesCS5B01G208300.1	Wheat	cytosol	77.25	80.72
TraesCS5B01G208500.1	Wheat	plastid	78.97	80.7
HORVU5Hr1G061850.11	Barley	plastid	78.97	80.7
TraesCS5A01G210200.1	Wheat	plastid	77.04	80.49
TraesCS5D01G216400.1	Wheat	cytosol, plastid	77.04	80.49
TraesCS5B01G208200.1	Wheat	cytosol, plastid	76.82	80.45
HORVU5Hr1G061760.2	Barley	plastid	76.82	80.45
TraesCS5D01G216600.1	Wheat	plastid	77.47	80.4
TraesCS5A01G215400.1	Wheat	plastid	77.9	79.78
HORVU0Hr1G012130.1	Barley	cytosol	40.34	79.66
HORVU3Hr1G051830.5	Barley	plastid	77.04	76.55
HORVU5Hr1G061820.6	Barley	plasma membrane	77.25	71.57
EES13968	Sorghum	plastid	73.18	71.34
KXG25279	Sorghum	plastid	72.96	69.53
OQU91855	Sorghum	cytosol	43.78	68.0
GSMUA_Achr5P24670_001	Banana	cytosol	40.56	63.64
GSMUA_Achr10P...	Banana	cytosol	42.06	59.57
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	54.08	57.4
GSMUA_Achr8P22630_001	Banana	mitochondrion	48.28	57.25
OQU85819	Sorghum	plastid	53.86	56.28
OQU90248	Sorghum	mitochondrion	52.15	55.35
GSMUA_Achr7P02350_001	Banana	cytosol	48.93	55.07
EER89389	Sorghum	cytosol	52.36	54.22
KXG40053	Sorghum	cytosol	53.22	52.88
EES15612	Sorghum	cytosol	44.64	50.73
EER95470	Sorghum	plastid	40.99	50.66
EES09159	Sorghum	cytosol	44.42	50.49
EER91583	Sorghum	plastid	40.13	48.83
EER92149	Sorghum	plastid	49.57	48.02
KXG20794	Sorghum	plastid	39.27	47.91
OQU92552	Sorghum	plastid	44.42	47.37
KXG20556	Sorghum	cytosol	43.35	43.35

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8081002	UniProt:C5XDR2	EnsemblPlants:EER98978
ProteinID:EER98978	ProteinID:EER98978.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF57	InterPro:Prot_kinase_dom
EnsemblPlantsGene:SORBI_3002G217100	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A84114	RefSeq:XP_002462457.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:60921101..60923918

Molecular Weight (calculated)

51646.5 Da

IEP (calculated)

9.378

GRAVY (calculated)

-0.409

Length

466 amino acids

Sequence
(BLAST)

001: MAGHAQSWRT YLCCGAGGSA AVEDDSGSTT RRRRITRRRG KDSPRSSSSR MSFTSLSSSE MLSPEDLSLT LSGSNLHAFT YAELRSATAG FSRANYLGCG
101: GFGPVYRGAV GEALRPGLRA QDVAVKYLDL EGGTQGHKEW LAEVFFLGQL RHKNLVKLIG YCYEAKHRML VYEFMSFGSL ENHLFKSVNG ALPWMTRMKI
201: AVGAAKGLAF LHNADPPVIY RDFKASNILL DSDYNTKLSD FGLAKDGPQG DETHVTTRVM GTHGYAAPEY ILTGHLTAKS DVYSFGVVLL ELLAGRQSVD
301: RSRRPREQNL VDWARPYLKH PDRLYRVMDP ALECQYSCRG AEVAAVVAYK CLSQNPKSRP TMREVVRALE PVLGMDDFFP AGPFVFTISV EEDKVVGVKV
401: EVEEKLPQQH QSHQDRHRQK YPNSSIHAGG IVLHGREGMV GGDDYTATLR RQRRAAAASY HKERGA

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.