Factsheet for GSMUA_Achr6P04420_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P24670_001	Banana	cytosol	52.85	78.11
GSMUA_Achr10P...	Banana	cytosol	57.86	77.2
GSMUA_Achr8P22630_001	Banana	mitochondrion	63.33	70.74
GSMUA_Achr7P02350_001	Banana	cytosol	65.6	69.57
GSMUA_Achr7P11420_001	Banana	mitochondrion	55.58	68.16
TraesCS5D01G216500.1	Wheat	plastid	39.18	64.18
GSMUA_Achr3P02100_001	Banana	plastid	53.53	60.1
TraesCS6D01G316600.1	Wheat	mitochondrion	56.04	59.13
Os06t0202900-01	Rice	cytosol, plasma membrane	56.72	58.45
HORVU5Hr1G061810.2	Barley	plastid	57.63	58.43
TraesCS5B01G208600.1	Wheat	plastid	58.31	58.18
HORVU3Hr1G051820.4	Barley	plastid	57.63	58.16
TraesCS7A01G163300.1	Wheat	cytosol	56.04	57.48
Zm00001d044995_P001	Maize	plastid	57.63	57.37
TraesCS5B01G208400.1	Wheat	plastid	57.4	57.14
HORVU5Hr1G061760.2	Barley	plastid	57.86	57.08
GSMUA_Achr10P...	Banana	cytosol	43.51	57.01
TraesCS5D01G216800.1	Wheat	plastid	58.77	56.95
TraesCS5A01G210200.1	Wheat	plastid	57.86	56.95
TraesCS7D01G165300.1	Wheat	cytosol	56.04	56.94
TraesCS5B01G208200.1	Wheat	cytosol, plastid	57.63	56.85
GSMUA_Achr1P26800_001	Banana	mitochondrion	42.6	56.84
TraesCS5A01G215200.1	Wheat	plastid	58.54	56.73
TraesCS5D01G216400.1	Wheat	cytosol, plastid	57.63	56.73
GSMUA_Achr8P26730_001	Banana	cytosol	42.6	56.5
TraesCS5B01G208500.1	Wheat	plastid	58.54	56.36
TraesCS5D01G216600.1	Wheat	plastid	57.63	56.35
TraesCS5A01G210300.1	Wheat	plastid	57.18	56.15
HORVU5Hr1G061850.11	Barley	plastid	58.31	56.14
Zm00001d037112_P001	Maize	plastid	56.72	56.08
OQU85819	Sorghum	plastid	56.95	56.05
TraesCS5B01G208300.1	Wheat	cytosol	56.95	56.05
EER89389	Sorghum	cytosol	57.4	56.0
GSMUA_Achr3P14980_001	Banana	cytosol	15.72	55.65
TraesCS5A01G215400.1	Wheat	plastid	57.4	55.38
Os09t0442100-01	Rice	plastid	57.63	55.24
Zm00001d018262_P001	Maize	cytosol, plastid	54.9	55.15
GSMUA_Achr7P19720_001	Banana	cytosol	43.05	55.1
Os02t0777800-01	Rice	plasma membrane	22.55	55.0
Zm00001d020631_P001	Maize	plastid	57.4	54.9
TraesCS7B01G069100.1	Wheat	cytosol	50.8	54.26
GSMUA_Achr2P17920_001	Banana	cytosol	47.15	54.19
EER98978	Sorghum	plastid	57.4	54.08
TraesCS6B01G367100.1	Wheat	plastid	56.72	54.01
HORVU3Hr1G051830.5	Barley	plastid	57.4	53.73
GSMUA_Achr6P22050_001	Banana	plastid	42.82	53.56
TraesCS6A01G336600.1	Wheat	mitochondrion	56.26	53.0
GSMUA_Achr7P21830_001	Banana	cytosol	48.97	51.93
GSMUA_Achr10P...	Banana	cytosol	46.24	51.92
EES13968	Sorghum	plastid	56.04	51.46
Os08t0457400-01	Rice	plasma membrane	55.58	51.05
Zm00001d032069_P001	Maize	cytosol, plastid	55.13	50.95
KXG25279	Sorghum	plastid	56.26	50.51
HORVU0Hr1G012130.1	Barley	cytosol	27.11	50.42
HORVU5Hr1G061820.6	Barley	plasma membrane	57.18	49.9
HORVU6Hr1G081330.2	Barley	nucleus, plastid	56.72	49.6
TraesCS1D01G091600.1	Wheat	plastid	53.53	49.58
TraesCS1A01G110000.1	Wheat	plastid	53.76	49.48
GSMUA_Achr7P27200_001	Banana	cytosol, plastid	43.96	48.61
GSMUA_Achr4P09620_001	Banana	cytosol	45.33	46.93
GSMUA_Achr3P15000_001	Banana	cytosol	25.06	46.81
GSMUA_Achr3P19770_001	Banana	plastid	30.52	44.82
GSMUA_Achr7P04920_001	Banana	cytosol	45.1	44.2
TraesCS1B01G109400.1	Wheat	mitochondrion, plastid	53.53	43.28
GSMUA_Achr3P19780_001	Banana	cytosol, extracellular, nucleus	13.44	41.55
GSMUA_Achr11P...	Banana	cytosol	48.52	39.37
HORVU1Hr1G019770.1	Barley	cytosol	53.53	37.72
GSMUA_Achr5P09740_001	Banana	cytosol	17.77	31.84
GSMUA_Achr3P27770_001	Banana	cytosol	43.28	23.03

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.2.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr6G04420_001	EnsemblPlants:GSMUA_Achr6P04420_001	EnsemblPlants:GSMUA_Achr6T04420_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T440
PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF72
InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002963155	SEG:seg

Description

protein kinase APK1B, chloroplast precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G04420_001]

Coordinates

chr6:+:3017376..3019952

Molecular Weight (calculated)

49201.9 Da

IEP (calculated)

10.065

GRAVY (calculated)

-0.532

Length

439 amino acids

Sequence
(BLAST)

001: MSRHSWRSFI TSCWRSTKEG SVTETKKPRP IPKSPQRMSY YDISSSGTPL SPEDLSLSLP GSNLHVFTLA ELKAVTRNFS TTNFIGSGGF GPVFKGYVDD
101: KLRPGLKAQH VAVKSLDLEG LQGHREWLAE VIFLGQLRHP HLAKLIGYCC EDEHRMLVYE YMARGSLENH LFKRLLASLP WSTRIKIAVG AAKGLAFLHE
201: AEKPVIYRDF KASNILLDSD YTAKLSDFGL AKDGPQGEET HVTTRVMGTR GYAAPEYLLT GHLTAKSDVY SFGVVLLELL SGRRSVDKNR SNREKNLVEW
301: ARPQLNNPQK LSRVMDRNLE GQYSTKGAQK AAAVAYKCLN LNPKKRPDMR AVVETLEPLL EMNDVPIGPF VYTAPAETEN DGRKEMDVKT AAKVNGLKQR
401: VPNSAVRSEA TIHMDSKGLY RNSPRHHQSS RRQNREHGV

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.