Factsheet for TraesCS6A01G336600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plasma membrane 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane, plastid
MultiLoc:	plasma membrane
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G316600.1	Wheat	mitochondrion	87.98	98.56
TraesCS6B01G367100.1	Wheat	plastid	95.06	96.1
HORVU6Hr1G081330.2	Barley	nucleus, plastid	91.42	84.86
OQU85819	Sorghum	plastid	69.96	73.09
Zm00001d018262_P001	Maize	cytosol, plastid	67.6	72.08
Os02t0777800-01	Rice	plasma membrane	26.39	68.33
GSMUA_Achr5P24670_001	Banana	cytosol	41.2	64.65
TraesCS7A01G163300.1	Wheat	cytosol	59.01	64.25
GSMUA_Achr10P...	Banana	cytosol	42.06	59.57
TraesCS4A01G073500.1	Wheat	cytosol, plastid	48.28	59.37
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	53.0	56.26
GSMUA_Achr8P22630_001	Banana	mitochondrion	46.57	55.22
TraesCS5A01G215200.1	Wheat	plastid	52.58	54.08
TraesCS4A01G010000.1	Wheat	mitochondrion, plastid	50.21	53.92
TraesCS5A01G210300.1	Wheat	plastid	51.5	53.69
TraesCS5A01G210200.1	Wheat	plastid	51.29	53.59
GSMUA_Achr7P02350_001	Banana	cytosol	47.21	53.14
TraesCS5A01G497700.1	Wheat	mitochondrion, plastid	26.39	53.02
TraesCS2A01G170600.1	Wheat	cytosol	51.07	52.89
TraesCS5A01G215400.1	Wheat	plastid	50.64	51.87
TraesCS1A01G138100.1	Wheat	plastid	40.34	51.51
TraesCS4A01G191500.1	Wheat	cytosol	43.13	49.02
TraesCS1A01G110000.1	Wheat	plastid	50.0	48.85
TraesCS7A01G416100.1	Wheat	mitochondrion	39.06	47.64
TraesCS5A01G144600.1	Wheat	mitochondrion, plastid	43.35	46.33
TraesCS6A01G024300.1	Wheat	cytosol	41.63	44.8
TraesCS4A01G031000.1	Wheat	plastid	40.99	42.44
TraesCS7A01G487900.1	Wheat	cytosol	42.7	41.54

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF254
InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6A01G336600	EnsemblPlants:TraesCS6A01G336600.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:570381454..570384332

Molecular Weight (calculated)

50594.2 Da

IEP (calculated)

9.973

GRAVY (calculated)

-0.386

Length

466 amino acids

Sequence
(BLAST)

001: MRAFLKGCFY PRGGATDPAA VADGDEATTA TAKATAPPRP SAKKTKKKSM RRAPSATARL RTLSFDNLSR TLASSGMHAF TVAELRAATR NFSGSHFIGE
101: GGFGPVYKGF LDDKVVPGMQ PQHVAVKYLD AEGPQGHREW LAEVVYLGMQ LSHPHLVKLV GYCYQEHHRM LVYEYMARGS LEHHLFKNLL ASLPWATRLK
201: IAVGAAKGLA FLHEAETPVI YRDFKASNIL LESDYTAKLS DFGLAKEGPS GDDTHVSTRV MGTHGYAAPE YILTGHLTAR SDVYSFGVVL LELLTGRRSV
301: DKRRRGREQN LVDWARPYLR RPDRLHRVMD PSLEGSYSAE AAAKAATVAY NCLHSVPKNR PTMREVVDSL EPLMRMSRDV PAGLFVYTAP SEPSPVAKAV
401: ADKADVAAEA GEEAKDGGAS ASAAAARKKC QRSAVHAESA APKYASSVAA GNESRGSPRQ RRDRGA

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.