Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G325400.1 | Wheat | mitochondrion, plastid | 97.41 | 97.41 |
| HORVU7Hr1G088710.2 | Barley | cytosol | 67.67 | 61.33 |
| CDY56059 | Canola | cytosol | 28.02 | 44.22 |
| VIT_17s0000g05890.t01 | Wine grape | cytosol | 51.29 | 39.02 |
| Bra014742.1-P | Field mustard | cytosol, plastid | 50.43 | 33.43 |
| TraesCS7A01G416100.1 | Wheat | mitochondrion | 54.31 | 32.98 |
| TraesCS1A01G138100.1 | Wheat | plastid | 51.72 | 32.88 |
| TraesCS4A01G073500.1 | Wheat | cytosol, plastid | 52.16 | 31.93 |
| CDX85839 | Canola | cytosol | 52.59 | 30.89 |
| Bra003798.1-P | Field mustard | cytosol | 52.16 | 30.63 |
| CDX68181 | Canola | cytosol | 52.16 | 30.63 |
| AT1G74490.1 | Thale cress | cytosol | 52.59 | 30.58 |
| Bra024805.1-P | Field mustard | plastid | 38.79 | 30.3 |
| TraesCS7A01G163300.1 | Wheat | cytosol | 55.6 | 30.14 |
| CDY49088 | Canola | cytosol | 46.12 | 29.97 |
| TraesCS4A01G191500.1 | Wheat | cytosol | 52.59 | 29.76 |
| TraesCS2A01G170600.1 | Wheat | cytosol | 55.6 | 28.67 |
| TraesCS4A01G010000.1 | Wheat | mitochondrion, plastid | 53.02 | 28.34 |
| TraesCS5A01G144600.1 | Wheat | mitochondrion, plastid | 52.16 | 27.75 |
| Bra019656.1-P | Field mustard | plastid | 44.83 | 27.59 |
| TraesCS6A01G024300.1 | Wheat | cytosol | 51.29 | 27.48 |
| TraesCS5A01G210300.1 | Wheat | plastid | 51.72 | 26.85 |
| TraesCS5A01G215200.1 | Wheat | plastid | 52.16 | 26.71 |
| TraesCS7A01G487900.1 | Wheat | cytosol | 54.74 | 26.51 |
| TraesCS5A01G210200.1 | Wheat | plastid | 50.86 | 26.46 |
| TraesCS4A01G031000.1 | Wheat | plastid | 51.29 | 26.44 |
| TraesCS6A01G336600.1 | Wheat | mitochondrion | 53.02 | 26.39 |
| TraesCS5A01G215400.1 | Wheat | plastid | 50.43 | 25.71 |
| CDY39319 | Canola | cytosol, plastid | 45.69 | 25.48 |
| TraesCS1A01G110000.1 | Wheat | plastid | 50.86 | 24.74 |
| CDY50604 | Canola | cytosol | 9.05 | 8.54 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:50.2.7 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF182 |
| InterPro:Prot_kinase_dom | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS5A01G497700 | EnsemblPlants:TraesCS5A01G497700.1 | SEG:seg |
Description
No Description!
Coordinates
chr5A:+:664807402..664808212
Molecular Weight (calculated)
25236.3 Da
IEP (calculated)
10.472
GRAVY (calculated)
-0.378
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKGSLENHL FRRGGSFEPL SWATRLKIAA GAARGLAFLH SPETQIIYRD FKASNILLDH DFAPKLSDFG LAKSGPAAGR SHVTTRVMGS YGYAAPEYVA
101: TGHLYVKSDV YGFGVVLLEL LTGLRAHDPN RPSHQANLVE WARPYIAGGR KLTGLMDQRL AGQYPPKAAL RAARLAHRCL CGDPKARPSM DDVVAKLEEI
201: DARGSRDALP PRPRPVPATS QRSPYRGSSK PA
101: TGHLYVKSDV YGFGVVLLEL LTGLRAHDPN RPSHQANLVE WARPYIAGGR KLTGLMDQRL AGQYPPKAAL RAARLAHRCL CGDPKARPSM DDVVAKLEEI
201: DARGSRDALP PRPRPVPATS QRSPYRGSSK PA
001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV
Arabidopsis Description
APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.