Factsheet for TraesCS4A01G010000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G294300.1	Wheat	mitochondrion, plastid	97.47	96.58
TraesCS4D01G293200.1	Wheat	mitochondrion, plastid	96.77	95.45
Os03t0179400-01	Rice	plasma membrane	78.8	80.47
Zm00001d027892_P001	Maize	plastid	77.88	75.78
KXG40053	Sorghum	cytosol	77.19	71.43
TraesCS4A01G073500.1	Wheat	cytosol, plastid	61.29	70.18
TraesCS2A01G170600.1	Wheat	cytosol	58.29	56.22
TraesCS7A01G163300.1	Wheat	cytosol	53.92	54.67
TraesCS4A01G191500.1	Wheat	cytosol	51.61	54.63
TraesCS5A01G215200.1	Wheat	plastid	55.99	53.64
TraesCS5A01G210300.1	Wheat	plastid	55.07	53.47
TraesCS5A01G210200.1	Wheat	plastid	54.61	53.14
TraesCS5A01G497700.1	Wheat	mitochondrion, plastid	28.34	53.02
TraesCS1A01G138100.1	Wheat	plastid	44.47	52.88
TraesCS5A01G215400.1	Wheat	plastid	55.3	52.75
TraesCS5A01G144600.1	Wheat	mitochondrion, plastid	51.61	51.38
TraesCS6A01G336600.1	Wheat	mitochondrion	53.92	50.21
TraesCS7A01G416100.1	Wheat	mitochondrion	43.32	49.21
TraesCS6A01G024300.1	Wheat	cytosol	47.93	48.04
TraesCS1A01G110000.1	Wheat	plastid	52.3	47.59
TraesCS4A01G031000.1	Wheat	plastid	45.62	44.0
TraesCS7A01G487900.1	Wheat	cytosol	46.31	41.96

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.2.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF72	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4A01G010000
EnsemblPlants:TraesCS4A01G010000.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:5835562..5839872

Molecular Weight (calculated)

47419.8 Da

IEP (calculated)

9.816

GRAVY (calculated)

-0.337

Length

434 amino acids

Sequence
(BLAST)

001: MARSAWRSLF GCFSSHAEAA AAAGKGEKMS KASKKKKSKK KVAAAGKAPR PSRSLHGRMS FSDLSMSGGM VSPEDLSLSL AGSDLHVFTI AELRAVTRDF
101: SMTNFIGEGG FGPVYKGYVD EKVKPGLRAQ PVAVKLLDLE GNQGHNEWLT EVIFLGQLRH PHLVKLIGYC YEDEHRLLVY EFMTRGSLEK LLFKKYAASL
201: QWSTRLKIAL GAAKGLAFLH EAENPVIYRD FKTSNILLDS DYKAKLSDFG LAKDGPEEDE THVSTRVMGT QGYAAPEYIM TGHLTAKSDV YGFGVVLLEL
301: LTGRKSVDKS RPPREQNLVD WARPYLNDSR RLDRVMDPNL AGQYAGGAVQ KAAALAYKCV SLNPKSRPHM SAVVSALEPL LALEEDSLAG PFVYVAPAEN
401: GNSGGGREGR HRRRAGRRKS GDAAESVAVV VERE

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.