Factsheet for Zm00001d027892_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40053	Sorghum	cytosol	90.13	85.71
Os03t0179400-01	Rice	plasma membrane	77.8	81.65
TraesCS4A01G010000.1	Wheat	mitochondrion, plastid	75.78	77.88
TraesCS4B01G294300.1	Wheat	mitochondrion, plastid	75.78	77.17
TraesCS4D01G293200.1	Wheat	mitochondrion, plastid	75.34	76.36
Zm00001d014243_P001	Maize	plastid	60.31	69.87
Zm00001d022126_P001	Maize	mitochondrion	57.17	55.56
Zm00001d044995_P001	Maize	plastid	54.26	54.88
Zm00001d020631_P001	Maize	plastid	55.83	54.25
Zm00001d018262_P001	Maize	cytosol, plastid	52.69	53.78
Zm00001d037112_P001	Maize	plastid	53.36	53.6
Zm00001d032069_P001	Maize	cytosol, plastid	53.36	50.11
Zm00001d029468_P002	Maize	plastid	52.91	50.0
Zm00001d029258_P001	Maize	mitochondrion, plastid	47.31	48.84
Zm00001d027734_P004	Maize	cytosol, plastid	42.38	48.84
Zm00001d032902_P001	Maize	plastid	41.93	48.83
Zm00001d047437_P001	Maize	plastid	47.31	47.95
Zm00001d046939_P001	Maize	cytosol	45.96	43.9
Zm00001d052376_P006	Maize	cytosol	42.38	42.19
Zm00001d002481_P005	Maize	mitochondrion, plasma membrane	28.03	41.67
Zm00001d005036_P003	Maize	cytosol	44.17	40.12
Zm00001d036656_P003	Maize	cytosol	42.38	38.49
Zm00001d036459_P005	Maize	mitochondrion, plastid	32.96	37.22
Zm00001d049599_P001	Maize	plastid	27.35	35.26
Zm00001d014697_P002	Maize	mitochondrion	32.06	35.05
Zm00001d004073_P002	Maize	plastid	16.37	25.8
Zm00001d025700_P001	Maize	plasma membrane	10.99	18.35

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:103631789	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	UniProt:A0A1D6JQE8	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONL94214.1	PFAM:PF07714
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF72	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000221D08A	EnsemblPlantsGene:Zm00001d027892	EnsemblPlants:Zm00001d027892_P001	EnsemblPlants:Zm00001d027892_T001
SEG:seg	:	:	:	:	:

Description

root-specific kinase 1

Coordinates

chr1:+:16843024..16848595

Molecular Weight (calculated)

48559.1 Da

IEP (calculated)

9.902

GRAVY (calculated)

-0.404

Length

446 amino acids

Sequence
(BLAST)

001: MARPGWGSLF GCFSSSSSSR GDGKKKQGKG KGKGAGNKMK KKQKSKQQQK VAAGSGGGSR PRSLQSRMSF TELSLSGMVS PEDLSLSLVG SNLHVFTIAE
101: LRAVTRDFSM THFIGEGGFG PVYRGYVDDK TKRGLAAQPV AVKLLDLEGG QGHTEWLTEV FFLGQLRHPH LVKLIGYCYE DEHRLLVYEF MTRGSLEKHL
201: FKKYAASLPW STRLKIAIGA AKGLAFLHEA EKPVIYRDFK TSNILLDSDY KAKLSDFGLA KDGPEDDETH VSTRVMGTQG YAAPEYIMTG HLTAKSDVYG
301: FGVVLLELLS GRKAVDKSRP PREQNLVEWA RPYLTDARRL DRVMDPSLVG QYSSRAAHKA AAVAHQCVAL NPKSRPHMSA VVEALEPLLA LDDCLVGPFV
401: YIAPPETTTA NGDEAAPVSS NKEGSGRRGG RRRSSGEGAA VVRPEE

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.