Factsheet for TraesCS4D01G293200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G294300.1	Wheat	mitochondrion, plastid	97.95	98.4
TraesCS4A01G010000.1	Wheat	mitochondrion, plastid	95.45	96.77
Os03t0179400-01	Rice	plasma membrane	78.18	80.94
Zm00001d027892_P001	Maize	plastid	76.36	75.34
KXG40053	Sorghum	cytosol	76.36	71.64
TraesCS4D01G231100.1	Wheat	cytosol	61.14	70.98
TraesCS5D01G216500.1	Wheat	plastid	36.82	60.45
TraesCS2D01G178100.1	Wheat	cytosol	56.82	55.43
TraesCS6D01G316600.1	Wheat	mitochondrion	51.82	54.81
TraesCS4D01G121800.3	Wheat	cytosol	50.91	54.63
TraesCS7D01G165300.1	Wheat	cytosol	53.18	54.17
TraesCS5D01G216800.1	Wheat	plastid	55.45	53.86
TraesCS7D01G461900.1	Wheat	mitochondrion, peroxisome	54.77	53.79
TraesCS5D01G216600.1	Wheat	plastid	54.55	53.45
TraesCS5D01G216400.1	Wheat	cytosol, plastid	54.09	53.36
TraesCS1D01G134500.1	Wheat	plastid	43.41	52.33
TraesCS7D01G409400.1	Wheat	cytosol	44.55	51.31
TraesCS5D01G147600.2	Wheat	plastid	50.68	51.15
TraesCS4D01G273600.1	Wheat	plastid	44.32	50.0
TraesCS6D01G027700.1	Wheat	cytosol	46.82	47.69
TraesCS1D01G091600.1	Wheat	plastid	51.36	47.68
TraesCS4D01G166800.1	Wheat	cytosol	48.41	47.65
TraesCS7D01G474600.1	Wheat	cytosol	45.68	42.14
TraesCS2D01G123700.1	Wheat	mitochondrion, plastid	37.95	23.72
TraesCS2D01G124300.1	Wheat	plastid	37.73	23.65

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.2.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF72	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4D01G293200
EnsemblPlants:TraesCS4D01G293200.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:464152850..464157335

Molecular Weight (calculated)

47905.4 Da

IEP (calculated)

9.958

GRAVY (calculated)

-0.351

Length

440 amino acids

Sequence
(BLAST)

001: MARSAWRSLF GCFSSHAEAA AAAAAAGKGE RKPPGGKKKK KSKKKVAAAG KAPRPSRSLH GRMSFSDLSM SGGMVSPEDL SLSLAGSDLH VFTIAELRAV
101: TRDFSMTNFI GEGGFGPVYK GYVDEKVKPG LRAQPVAVKL LDLEGNQGHN EWLTEVIFLG QLRHPHLVKL IGYCYEDEHR LLVYEFMTRG SLEKLLFRKY
201: AASLQWSTRL KIALGAAKGL AFLHEAQNPV IYRDFKTSNI LLDSDYKAKL SDFGLAKDGP EEDETHVSTR VMGTQGYAAP EYIMTGHLTA KSDVYGFGVV
301: LLELLTGRKS VDKSRPPREQ NLVDWARPYL NDSRRLDRVM DPNLAGQYAG GAAQRAAALA YKCVSLNPKS RPHMSAVVSA LEPLLALEED SLAGPFVYVA
401: PPDNGSSGGG GSREGRHRRR AGRRKSGDVA ESVAVVVERE

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.