Factsheet for Zm00001d029468_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92149	Sorghum	plastid	90.47	88.77
TraesCS7B01G376400.1	Wheat	mitochondrion, peroxisome	66.53	70.88
TraesCS7D01G461900.1	Wheat	mitochondrion, peroxisome	66.95	70.54
HORVU7Hr1G108150.1	Barley	mitochondrion, peroxisome	66.31	70.18
Os03t0407900-01	Rice	cytosol	70.34	66.4
Zm00001d022126_P001	Maize	mitochondrion	63.14	64.92
GSMUA_Achr3P02100_001	Banana	plastid	49.36	59.59
Zm00001d014243_P001	Maize	plastid	47.67	58.44
Zm00001d027892_P001	Maize	plastid	50.0	52.91
Zm00001d018262_P001	Maize	cytosol, plastid	47.67	51.49
Zm00001d044995_P001	Maize	plastid	47.67	51.02
Zm00001d020631_P001	Maize	plastid	48.94	50.33
Zm00001d037112_P001	Maize	plastid	47.03	50.0
Zm00001d032902_P001	Maize	plastid	39.62	48.83
Zm00001d027734_P004	Maize	cytosol, plastid	39.19	47.8
Zm00001d032069_P001	Maize	cytosol, plastid	47.25	46.95
Zm00001d029258_P001	Maize	mitochondrion, plastid	41.1	44.91
Zm00001d047437_P001	Maize	plastid	40.47	43.41
Zm00001d046939_P001	Maize	cytosol	41.95	42.4
Zm00001d002481_P005	Maize	mitochondrion, plasma membrane	25.42	40.0
Zm00001d052376_P006	Maize	cytosol	36.02	37.95
Zm00001d036656_P003	Maize	cytosol	38.77	37.27
Zm00001d005036_P003	Maize	cytosol	37.92	36.46
Zm00001d036459_P005	Maize	mitochondrion, plastid	30.51	36.46
Zm00001d014697_P002	Maize	mitochondrion	30.93	35.78
Zm00001d049599_P001	Maize	plastid	25.0	34.1
Zm00001d004073_P002	Maize	plastid	13.98	23.32
Zm00001d025700_P001	Maize	plasma membrane	11.23	19.85

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:103636168	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	UniProt:A0A1D6K5F8	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONL98818.1	PFAM:PF07714
PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF111	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00022173B9	EnsemblPlantsGene:Zm00001d029468	EnsemblPlants:Zm00001d029468_P002
EnsemblPlants:Zm00001d029468_T002	SEG:seg	:	:	:	:

Description

root-specific kinase 1

Coordinates

chr1:-:72028952..72032668

Molecular Weight (calculated)

51895.5 Da

IEP (calculated)

10.023

GRAVY (calculated)

-0.610

Length

472 amino acids

Sequence
(BLAST)

001: MARSSNKKKS QQLKQKPVSA WQFLFRGCLG GAASGSRRRK NKVQPRSSTQ QGRAAPPSPA PSSSTGLQHQ RLSLTDVMST ASDQDLSVSL AGSNLHVFTV
101: GELKAATQGF VDSNFLGEGG FGPVYRGAVA EGAKPGLRSQ QIAVKLWDPE GTQGHKEWLS EVIFLGQLRH PNLVRLVGYC SEEEHRLLVY EYMPKGSLEN
201: HLFKKFPPVL SWATRLNIAV GAAKGLAFLH DAEKPVIYRD FKTSNILLDP DYEAKLSDFG LAKDGPEGDD THVSTRVMGT QGYAAPEYIL TGHLTAKSDV
301: YSFGVVLLEM LSGRRAVDRD RPSREQHLVE HMRSWLKDPQ KLARVMDPAL EGRYPAAAAH RAALVAYQCL SGSPKNRPDM SRVVQDLEPL LTATADDDVP
401: ASEPTACVEP ERKDRTRRSD GGDRRDKARR PDKAPARSPN PKRAVRRRAP GQSEEFWEWN MPAAAAPGQG KS

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.