Factsheet for Zm00001d037112_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

peroxisome 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	cytosol

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044995_P001	Maize	plastid	91.22	91.84
EER89389	Sorghum	cytosol	90.54	89.33
Os06t0202900-01	Rice	cytosol, plasma membrane	79.5	82.86
TraesCS7A01G163300.1	Wheat	cytosol	75.45	78.27
TraesCS7D01G165300.1	Wheat	cytosol	75.9	78.01
TraesCS7B01G069100.1	Wheat	cytosol	68.69	74.21
Zm00001d018262_P001	Maize	cytosol, plastid	65.99	67.05
GSMUA_Achr5P24670_001	Banana	cytosol	44.37	66.33
GSMUA_Achr10P...	Banana	cytosol	45.05	60.79
Zm00001d014243_P001	Maize	plastid	52.48	60.52
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	56.08	56.72
GSMUA_Achr8P22630_001	Banana	mitochondrion	49.55	55.98
GSMUA_Achr7P02350_001	Banana	cytosol	50.0	53.62
Zm00001d020631_P001	Maize	plastid	55.18	53.38
Zm00001d022126_P001	Maize	mitochondrion	55.18	53.38
Zm00001d027892_P001	Maize	plastid	53.6	53.36
Zm00001d032069_P001	Maize	cytosol, plastid	56.08	52.42
Zm00001d027734_P004	Maize	cytosol, plastid	44.59	51.16
Zm00001d032902_P001	Maize	plastid	42.34	49.09
Zm00001d029258_P001	Maize	mitochondrion, plastid	46.62	47.92
Zm00001d047437_P001	Maize	plastid	46.85	47.27
Zm00001d029468_P002	Maize	plastid	50.0	47.03
Zm00001d046939_P001	Maize	cytosol	45.27	43.04
Zm00001d002481_P005	Maize	mitochondrion, plasma membrane	28.38	42.0
Zm00001d052376_P006	Maize	cytosol	41.44	41.07
Zm00001d005036_P003	Maize	cytosol	43.24	39.1
Zm00001d036656_P003	Maize	cytosol	42.57	38.49
Zm00001d049599_P001	Maize	plastid	28.38	36.42
Zm00001d014697_P002	Maize	mitochondrion	32.88	35.78
Zm00001d036459_P005	Maize	mitochondrion, plastid	31.31	35.19
Zm00001d004073_P002	Maize	plastid	16.44	25.8
Zm00001d025700_P001	Maize	plasma membrane	13.74	22.85

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	UniProt:A0A1D6LUJ6	ProteinID:AQK83002.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF179	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000220C5C1	EnsemblPlantsGene:Zm00001d037112	EnsemblPlants:Zm00001d037112_P001	EnsemblPlants:Zm00001d037112_T001
SEG:seg	:	:	:	:	:

Description

root-specific kinase 1

Coordinates

chr6:-:112673294..112675545

Molecular Weight (calculated)

48411.7 Da

IEP (calculated)

8.145

GRAVY (calculated)

-0.309

Length

444 amino acids

Sequence
(BLAST)

001: MGLRESLLGC FGAGGGDQQE QGHEPAAARP AASRRPGGKP TLRRLSTANL RSLSLQDLSR KLETTKLHAF TLDELRAATR NFSAANFLGE GGFGPVYKGF
101: VDGRLRPGLQ PQHVAVKYLD SDGVQGHREW LAEVVYLGML SHPHLVELVG FCNQDDHRML VYEYMPRQSL ENHLFKNLLA SLPWSTRLKI AVGAAKGLAF
201: LHEAETPVIY RDFKASNILL DSDYTAKLSD FGLAKEGPQG DATHVTTRVM GTHGYAAPEY ILTGHLTARS DVYSFGVVLL ELLTGRRSVD KSRRGREQSL
301: VDWARPYLRR ADRLHRFMDP GLEAQYSPRA AEAAAKVAHQ CLQSVPKARP TMRDVVDALQ PLLALDDDVP IGPFVFTVGG AAGAEADGVA VADDVDDQVD
401: AEAGGRQGSK MHVMSAVHAE SPLRSRYASA VKRPESPPTL MSRA

Best Arabidopsis Sequence Match ( AT5G35580.1 )
(BLAST)

001: MVLCFQDPDN IYSPKKTKKD DGERVITKQK SFLGLSILDI SNPSSTTLSE DLSISLAGSD LHVFTQAELR VITQSFSSSN FLGEGGFGPV HKGFIDDKLR
101: PGLKAQPVAV KLLDLDGLQG HREFMTEVMC LGKLKHPNLV KLIGYCCEEA HRLLVYEFMP RGSLESQLFR RCSLPLPWTT RLNIAYEAAK GLQFLHEAEK
201: PIIYRDFKAS NILLDSDYTA KLSDFGLAKD GPQGDDTHVS TRVMGTQGYA APEYIMTGHL TAKSDVYSFG VVLLELLTGR KSVDIARSSR KETLVEWARP
301: MLNDARKLGR IMDPRLEDQY SETGARKAAT LAYQCLRYRP KTRPDISTVV SVLQDIKDYK DDIPIGIFTY TVPTKPRREV KETSLQNFDK PRRETKVTSL
401: QNFDKTRREV KDTSLQNFDK TRREVKETSL QNFDKTRREV KETSLQNFDK PRNVSTTDNH QKFRSPAHTA RNHRITLRNG YNSPMRNEAG GERY

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT5G35580]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.