Factsheet for Os06t0202900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G165300.1	Wheat	cytosol	81.46	80.32
Zm00001d044995_P001	Maize	plastid	83.1	80.27
TraesCS7A01G163300.1	Wheat	cytosol	80.52	80.14
EER89389	Sorghum	cytosol	84.04	79.56
Zm00001d037112_P001	Maize	plastid	82.86	79.5
TraesCS7B01G069100.1	Wheat	cytosol	73.71	76.4
GSMUA_Achr5P24670_001	Banana	cytosol	46.24	66.33
Os02t0777800-01	Rice	plasma membrane	27.23	64.44
GSMUA_Achr10P...	Banana	cytosol	47.42	61.4
Os10t0395000-01	Rice	plasma membrane	53.76	58.87
GSMUA_Achr8P22630_001	Banana	mitochondrion	52.35	56.74
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	58.45	56.72
Os03t0179400-01	Rice	plasma membrane	56.1	56.24
Os12t0121100-01	Rice	cytosol	48.36	54.93
GSMUA_Achr7P02350_001	Banana	cytosol	53.05	54.59
Os09t0442100-01	Rice	plastid	57.28	53.28
Os03t0159100-01	Rice	plasma membrane	46.24	52.39
Os07t0613500-01	Rice	plasma membrane	56.34	50.96
Os11t0121400-01	Rice	cytosol, plasma membrane	49.06	50.61
Os05t0591800-00	Rice	cytosol	30.75	50.58
Os10t0431900-01	Rice	plasma membrane	44.6	50.0
Os08t0457400-01	Rice	plasma membrane	55.16	49.16
Os03t0364400-01	Rice	plasma membrane	48.83	46.53
Os03t0407900-01	Rice	cytosol	53.05	45.2
Os06t0703000-01	Rice	plasma membrane	42.49	45.02
Os06t0663200-01	Rice	cytosol, plasma membrane	46.95	42.64
Os11t0122150-00	Rice	cytosol	9.86	41.58
Os11t0121500-01	Rice	cytosol	9.62	28.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:4340422	EMBL:AK109607	ProteinID:BAD35980.1
ProteinID:BAF18997.1	ProteinID:BAS96670.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os06g0202900
EnsemblPlants:Os06t0202900-01	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF179	InterPro:Prot_kinase_dom	UniProt:Q69SQ5	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0000403938	RefSeq:XP_015644467.1	SEG:seg	:	:	:

Description

RECEPTOR-LIKE CYTOPLASMIC KINASE 203Serine/threonine protein kinase domain containing protein. (Os06t0202900-01)

Coordinates

chr6:-:5196777..5199383

Molecular Weight (calculated)

46767.8 Da

IEP (calculated)

9.003

GRAVY (calculated)

-0.350

Length

426 amino acids

Sequence
(BLAST)

001: MARGLFACFG RGGEEAEEEA GKRPALRRRR TVNLRSLSLE DLSRTLAKTN LHAFTLDELK AATKNFSTSN FLGEGGFGPV YKGFVDGELR PGALESQHVA
101: VKYLDSDGVQ GHREWLAEVV YLGMLSHPHL VKLVGFCNQD DHRMLVYEYM PRGSLENHLF KNLLASLPWS TRLKIAVGAA KGLAFLHEAE TPVIYRDFKA
201: SNILLDKDYT AKLSDFGLAK EGPQGDATHV TTRVMGTHGY AAPEYILTGH LTARSDVYSF GVVLLELLTG RRSVDKRRRG REQNLVDWAR PYLRRADRLH
301: RIMDPSLELQ YSARAAHAAA KVAHQCLQSV PKSRPCMRDV VDALEPLLAV DDDVPMGPFV FTVGGEEAAA AAAGSSAAGD AGDDEPARGS RRGKKHVTSA
401: VHAESPLRDG RYASRVKRPE SPPSVI

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.