Factsheet for TraesCS1A01G110000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G091600.1	Wheat	plastid	96.44	97.05
TraesCS1B01G109400.1	Wheat	mitochondrion, plastid	95.81	84.16
EES13968	Sorghum	plastid	75.89	75.73
KXG25279	Sorghum	plastid	76.1	74.23
Zm00001d032069_P001	Maize	cytosol, plastid	73.58	73.89
TraesCS5A01G210200.1	Wheat	plastid	68.13	72.87
TraesCS5A01G215200.1	Wheat	plastid	69.18	72.85
TraesCS5A01G210300.1	Wheat	plastid	67.71	72.26
Os08t0457400-01	Rice	plasma membrane	72.12	71.97
TraesCS5A01G215400.1	Wheat	plastid	67.51	70.77
HORVU1Hr1G019770.1	Barley	cytosol	90.15	69.02
GSMUA_Achr5P24670_001	Banana	cytosol	38.16	61.28
GSMUA_Achr10P...	Banana	cytosol	38.99	56.53
TraesCS4A01G073500.1	Wheat	cytosol, plastid	43.82	55.15
GSMUA_Achr8P22630_001	Banana	mitochondrion	45.28	54.96
TraesCS7A01G163300.1	Wheat	cytosol	48.64	54.21
GSMUA_Achr6P04420_001	Banana	mitochondrion, plastid	49.48	53.76
TraesCS4A01G010000.1	Wheat	mitochondrion, plastid	47.59	52.3
GSMUA_Achr7P02350_001	Banana	cytosol	44.44	51.21
TraesCS5A01G497700.1	Wheat	mitochondrion, plastid	24.74	50.86
TraesCS2A01G170600.1	Wheat	cytosol	47.38	50.22
TraesCS6A01G336600.1	Wheat	mitochondrion	48.85	50.0
TraesCS1A01G138100.1	Wheat	plastid	37.95	49.59
TraesCS4A01G191500.1	Wheat	cytosol	41.93	48.78
TraesCS5A01G144600.1	Wheat	mitochondrion, plastid	42.98	47.02
TraesCS6A01G024300.1	Wheat	cytosol	41.93	46.19
TraesCS7A01G416100.1	Wheat	mitochondrion	36.48	45.55
TraesCS4A01G031000.1	Wheat	plastid	40.04	42.44
TraesCS7A01G487900.1	Wheat	cytosol	40.67	40.5

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF86
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	EnsemblPlantsGene:TraesCS1A01G110000	EnsemblPlants:TraesCS1A01G110000.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:108922320..108924252

Molecular Weight (calculated)

52938.1 Da

IEP (calculated)

8.747

GRAVY (calculated)

-0.409

Length

477 amino acids

Sequence
(BLAST)

001: MASAQPWRSM FCCVGGAAAG AATDDEGPSP SSTPRRRRGE RRTLLPSSSA STASRLSLSS LGSTGTLTPE DLSLTLSGSN LHAFTYAELR AATAGFSRSR
101: YLGCGGFGPV YKGQLAAELR PGLEAQTVAV KYLDLDSSSQ GHNEWLAEVF FLGQLRHRNL VKLVGYCYEE EHRMLAYEYM GTASLEKHLF RSIDGPMPWM
201: TRMKIAVGAA KGLAFLHGAD TPVIFRDLKA SNILLDSDYT AKLSDFGLAK DGPNGDATHV TTRIMGTHGY AAPEYIMTGH LTAKSDVYSF GVVLLELLSG
301: RRSIDRARRS REQSLVDYAR PYLKKQDKLH RVMDPALECQ YSCQGAELAA RVAYKCLSQN SKLRPTMKEV VQALEPILKM DDYLQVGPFV FTVVVENTDR
401: NVEKKEKLID DEWKADMKVE KIVEDKHQSH QDRHRQKFPN SMIHADILLQ RDGAIGPYTT ALQRHRRASS YTEERGA

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.