Factsheet for TraesCS5A01G144600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G147600.2	Wheat	plastid	98.62	98.62
HORVU5Hr1G046020.3	Barley	cytosol	88.3	93.67
Os12t0121100-01	Rice	cytosol	79.36	92.27
TraesCS5B01G143500.1	Wheat	cytosol	90.14	91.61
EES15612	Sorghum	cytosol	83.26	88.54
EES09159	Sorghum	cytosol	82.8	88.05
TraesCS4A01G191500.1	Wheat	cytosol	82.34	87.56
Os11t0121400-01	Rice	cytosol, plasma membrane	82.11	86.68
GSMUA_Achr10P...	Banana	cytosol	71.56	79.8
CDY68189	Canola	cytosol	68.12	78.36
GSMUA_Achr7P21830_001	Banana	cytosol	74.31	78.26
Bra000295.1-P	Field mustard	cytosol	68.58	75.89
AT5G01020.1	Thale cress	plastid	70.41	74.88
CDX83496	Canola	cytosol, plastid	68.58	73.28
PGSC0003DMT400071214	Potato	cytosol	70.87	72.54
Solyc10g074710.1.1	Tomato	plastid	70.87	72.54
VIT_08s0056g00150.t01	Wine grape	cytosol	71.79	72.45
KRH40618	Soybean	cytosol	69.72	70.37
Zm00001d052376_P006	Maize	cytosol	72.25	70.31
Os11t0121500-01	Rice	cytosol	23.17	69.66
KRH00549	Soybean	cytosol	69.72	68.93
Os11t0122150-00	Rice	cytosol	15.83	68.32
Zm00001d005036_P003	Maize	cytosol	74.08	65.78
GSMUA_Achr11P...	Banana	cytosol	75.69	61.0
TraesCS4A01G073500.1	Wheat	cytosol, plastid	48.17	55.41
TraesCS1A01G138100.1	Wheat	plastid	46.1	55.07
TraesCS5A01G497700.1	Wheat	mitochondrion, plastid	27.75	52.16
TraesCS4A01G010000.1	Wheat	mitochondrion, plastid	51.38	51.61
TraesCS7A01G416100.1	Wheat	mitochondrion	45.18	51.57
TraesCS7A01G163300.1	Wheat	cytosol	47.48	48.36
TraesCS4A01G031000.1	Wheat	plastid	49.31	47.78
TraesCS2A01G170600.1	Wheat	cytosol	48.17	46.67
TraesCS7A01G487900.1	Wheat	cytosol	51.15	46.56
TraesCS6A01G024300.1	Wheat	cytosol	45.87	46.19
TraesCS5A01G215200.1	Wheat	plastid	47.94	46.14
TraesCS5A01G210200.1	Wheat	plastid	47.02	45.96
TraesCS5A01G210300.1	Wheat	plastid	47.02	45.86
TraesCS5A01G215400.1	Wheat	plastid	47.25	45.27
TraesCS6A01G336600.1	Wheat	mitochondrion	46.33	43.35
TraesCS1A01G110000.1	Wheat	plastid	47.02	42.98
KRH13000	Soybean	cytosol	17.2	42.13

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF136	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5A01G144600	EnsemblPlants:TraesCS5A01G144600.1	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr5A:+:320559753..320563924

Molecular Weight (calculated)

48408.0 Da

IEP (calculated)

10.160

GRAVY (calculated)

-0.455

Length

436 amino acids

Sequence
(BLAST)

001: MRGWATAGRG TRAPPTTTPQ ARRGGQRWGT AARGRRMPSS PRTRKQVHLL QHSDKNALAD RKHTRTSSDV SDPPTPRKIE DAKNISIYNN VIAFTLFELE
101: TITKSFRADY VLGEGGFGTV YKGYIDENVR VGLKSLPVAV KVLNKDGHQG HREWLTEVNF LGQLRHPNLV KLIGYCCEDD HRLLVYEFMF RGSLENHLFR
201: KTATPLPWAT RMSIALGAAK GLACLHNAER PVIYRDFKTS NILLDSDYTA KLSDFGLAKA GPEGDETHVS TRVMGTYGYA APEYVMTGHL TARSDVYSFG
301: VVLLELLTGR KSIDKSRASR EHSLVDWVRP KLSDKRRLHQ IIDPKLEGQY SVRAAHKACS LAYYCLSQNP KARPLMSDVV ETLEPLQSGG GSDGAIVQAG
401: GLPDYRVRRS LTGNSVHCRA IPNPKCSPAV PACRVR

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.