Factsheet for PGSC0003DMT400071214

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g074710.1.1	Tomato	plastid	99.06	99.06
CDY68189	Canola	cytosol	75.82	85.22
AT5G01020.1	Thale cress	plastid	80.99	84.15
VIT_08s0056g00150.t01	Wine grape	cytosol	84.74	83.56
Bra000295.1-P	Field mustard	cytosol	76.53	82.74
CDX83496	Canola	cytosol, plastid	78.17	81.62
Os12t0121100-01	Rice	cytosol	70.42	80.0
GSMUA_Achr10P...	Banana	cytosol	73.24	79.8
GSMUA_Achr7P21830_001	Banana	cytosol	77.46	79.71
TraesCS4A01G191500.1	Wheat	cytosol	74.88	77.8
EES15612	Sorghum	cytosol	74.65	77.56
TraesCS4D01G121800.3	Wheat	cytosol	74.65	77.56
TraesCS4B01G123800.2	Wheat	cytosol	74.41	77.32
EES09159	Sorghum	cytosol	74.41	77.32
HORVU5Hr1G046020.3	Barley	cytosol	74.18	76.89
Os11t0121400-01	Rice	cytosol, plasma membrane	74.41	76.76
TraesCS5B01G143500.1	Wheat	cytosol	74.65	74.13
Os11t0122150-00	Rice	cytosol	17.37	73.27
HORVU4Hr1G023850.2	Barley	plastid	72.54	71.86
TraesCS5D01G147600.2	Wheat	plastid	72.54	70.87
TraesCS5A01G144600.1	Wheat	mitochondrion, plastid	72.54	70.87
Zm00001d052376_P006	Maize	cytosol	66.43	63.17
Os11t0121500-01	Rice	cytosol	21.36	62.76
GSMUA_Achr11P...	Banana	cytosol	76.76	60.44
Zm00001d005036_P003	Maize	cytosol	68.08	59.06
PGSC0003DMT400061697	Potato	cytosol, plastid	51.88	57.25
PGSC0003DMT400007503	Potato	cytosol	50.23	57.07
PGSC0003DMT400005987	Potato	plastid	54.46	56.31
PGSC0003DMT400071701	Potato	cytosol	54.93	53.3
PGSC0003DMT400040626	Potato	plastid	52.11	52.73
PGSC0003DMT400011147	Potato	mitochondrion, plasma membrane, plastid, vacuole	50.0	50.24
PGSC0003DMT400035255	Potato	cytosol	51.64	49.77
PGSC0003DMT400033828	Potato	cytosol	49.53	48.73
KRH13000	Soybean	cytosol	18.78	44.94
PGSC0003DMT400012413	Potato	cytosol	48.59	44.61

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102586552	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1CNC7	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400027689	PGSC:PGSC0003DMG400027689	EnsemblPlants:PGSC0003DMT400071214
PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF136
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002959D4A
RefSeq:XP_006362327.1	SEG:seg	:	:	:	:

Description

Protein kinase APK1B, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG400027689]

Coordinates

chr10:+:48420170..48423831

Molecular Weight (calculated)

47297.3 Da

IEP (calculated)

9.216

GRAVY (calculated)

-0.398

Length

426 amino acids

Sequence
(BLAST)

001: MGNCGTREES AVVSNAHHQV QQQQGLSLGS RIGIDSKKHN HSRSTSDLSD PSTPRNLEDF RKNAVLYTHI IAFTLFELET ITKSFRSDYI LGEGGFGTVY
101: KGYIDENVRV GLKSLPVAVK VLNKEGLQGH REWLTEVNFL GQLRHPNLVK LIGYCCEDDH RLLVYEFMFR GSLENHLFRR ATVSLSWATR MMIALGAAKG
201: LAFLHNAERP VIYRDFKTSN ILLDSDYTAK LSDFGLAKAG PQGDETHVST RVMGTYGYAA PEYVMTGHLT ARSDVYSFGV VLLELLTGRK SVDKTRPSKE
301: QNLVDWARPK LNDKRKMLQI IDPRLDNQYS VRAAQKACSL AYYCLSQNPK ARPLMSDVVE TLEPLQSSGG STNEASSTET AVRFAIGRVP DYRTHHRYGS
401: SLGTAAGCRS PNPNCSPGGP AACRVR

Best Arabidopsis Sequence Match ( AT5G01020.1 )
(BLAST)

001: MGNCGTRDEA AVFTPQAQAQ QLQKKHSRSV SDLSDPSTPR FRDDSRTPIS YAQVIPFTLF ELETITKSFR PDYILGEGGF GTVYKGYIDD NLRVGLKSLP
101: VAVKVLNKEG LQGHREWLTE VNFLGQLRHP NLVKLIGYCC EDDHRLLVYE FMLRGSLENH LFRKTTAPLS WSRRMMIALG AAKGLAFLHN AERPVIYRDF
201: KTSNILLDSD YTAKLSDFGL AKAGPQGDET HVSTRVMGTY GYAAPEYVMT GHLTARSDVY SFGVVLLEML TGRKSVDKTR PSKEQNLVDW ARPKLNDKRK
301: LLQIIDPRLE NQYSVRAAQK ACSLAYYCLS QNPKARPLMS DVVETLEPLQ CTGDALIPCA TTTAGAAFAM GGVPDYRMHR RFAKNVGPGA ICRSPNPNYS
401: PGGPAACRVR

Arabidopsis Description

PBL8Probable serine/threonine-protein kinase PBL8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXZ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.