Factsheet for PGSC0003DMT400071701

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g041940.2.1	Tomato	cytosol, plastid	95.67	96.77
PGSC0003DMT400005987	Potato	plastid	76.54	81.55
VIT_11s0016g01060.t01	Wine grape	mitochondrion, plastid	71.53	71.04
CDY72324	Canola	cytosol, plasma membrane	47.84	65.83
KRH37497	Soybean	plastid	69.02	65.44
AT2G05940.1	Thale cress	cytosol	68.79	65.37
KRH12542	Soybean	cytosol	68.11	65.28
KRH19325	Soybean	nucleus	66.97	65.19
CDX74646	Canola	endoplasmic reticulum, plasma membrane	66.74	65.11
Bra035394.1-P	Field mustard	endoplasmic reticulum, plasma membrane	66.74	65.11
CDY33401	Canola	cytosol	67.65	64.99
CDY65349	Canola	cytosol	67.43	64.77
Bra015174.1-P	Field mustard	cytosol	67.43	64.77
KRH02603	Soybean	nucleus	66.51	64.04
PGSC0003DMT400011147	Potato	mitochondrion, plasma membrane, plastid, vacuole	56.72	58.73
PGSC0003DMT400033828	Potato	cytosol	55.13	55.89
PGSC0003DMT400012413	Potato	cytosol	58.77	55.6
PGSC0003DMT400071214	Potato	cytosol	53.3	54.93
AT5G35580.2	Thale cress	cytosol	63.1	54.74
PGSC0003DMT400061697	Potato	cytosol, plastid	47.61	54.15
PGSC0003DMT400007503	Potato	cytosol	45.33	53.07
PGSC0003DMT400040626	Potato	plastid	50.57	52.73
PGSC0003DMT400035255	Potato	cytosol	45.79	45.48

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102580142	MapMan:18.4.1.37.1	MapMan:26.8.2.2.3	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CP64	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400027893
PGSC:PGSC0003DMG400027893	EnsemblPlants:PGSC0003DMT400071701	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF123	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296FC91
RefSeq:XP_006342386.1	SEG:seg	:	:	:	:

Description

Avr9/Cf-9 induced kinase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400027893]

Coordinates

chr7:+:39055085..39057231

Molecular Weight (calculated)

49420.0 Da

IEP (calculated)

9.650

GRAVY (calculated)

-0.532

Length

439 amino acids

Sequence
(BLAST)

001: MTVMKIGWES LVPRCIKSQE NSKRNPKIVK VSVTKQLSFH GIPVSDISSS TISSDLSISL AGSNIHAFTQ QELRVITQNF STSNFIGEGG FGPVHKGFID
101: DKLRPNAIKA QPVAVKNLDL DGTQGHREWL TEVIFLGQLR HPHLVKLIGY CCEEDNRLLV YEYMPRGSLE NQLFRRYSVS LPWSTRMKIA IGAAKGLAFL
201: HEAKKPVIYR DFKASNILLD SDYTAKLSDF GLAKDGPEGD DTHVSTRVMG THGYAAPEYI MTGHLTAASD VYSFGVVLLE LLTGRRSVDK GRPHREQNLV
301: DWARPQLKDP RKLRRIMDPR LEGMYSEEGV QKAALVAYQC LSNRPKARPD MSNVVTTLEP LKDYEDNSMV TFVYTAPTDD QQEVKVKESS ASPHHHHQKQ
401: HHHHHNRRST PSSPTIHSET TIHKRLTPNS PLQNGFKRS

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.