Factsheet for Solyc07g041940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071701	Potato	cytosol	96.77	95.67
Solyc05g025820.2.1	Tomato	cytosol	74.65	79.41
VIT_11s0016g01060.t01	Wine grape	mitochondrion, plastid	72.12	70.81
CDY72324	Canola	cytosol, plasma membrane	48.62	66.14
KRH37497	Soybean	plastid	69.82	65.44
KRH19325	Soybean	nucleus	67.97	65.41
AT2G05940.1	Thale cress	cytosol	69.59	65.37
KRH12542	Soybean	cytosol	68.89	65.28
CDY33401	Canola	cytosol	68.66	65.21
CDY65349	Canola	cytosol	68.43	64.99
Bra015174.1-P	Field mustard	cytosol	68.43	64.99
Bra035394.1-P	Field mustard	endoplasmic reticulum, plasma membrane	67.05	64.67
CDX74646	Canola	endoplasmic reticulum, plasma membrane	67.05	64.67
KRH02603	Soybean	nucleus	67.51	64.25
Solyc12g049360.1.1	Tomato	vacuole	56.45	58.47
Solyc08g061250.2.1	Tomato	cytosol	56.45	56.06
Solyc06g062920.2.1	Tomato	plastid	58.99	55.17
Solyc10g074710.1.1	Tomato	plastid	53.92	54.93
AT5G35580.2	Thale cress	cytosol	63.36	54.35
Solyc01g028830.2.1	Tomato	plastid	47.93	53.89
Solyc12g009310.1.1	Tomato	cytosol	46.08	53.33
Solyc08g074980.2.1	Tomato	plastid	51.15	52.61
Solyc07g042590.2.1	Tomato	cytosol	46.08	45.25

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.2.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
UniProt:K4CE59	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF123	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc07g041940.2	EnsemblPlants:Solyc07g041940.2.1	UniParc:UPI000276BC07	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:54672988..54675245

Molecular Weight (calculated)

48779.2 Da

IEP (calculated)

9.732

GRAVY (calculated)

-0.529

Length

434 amino acids

Sequence
(BLAST)

001: MKIGWESLVP SCIKSHENSK KNPKMVKVSV TKQISFHGIP VSDLSSSTIS SDLSISLAGS NIHAFTQQEL RVITQNFSTS NFIGEGGFGP VHKGFIDDKL
101: RPNAIKAQPV AVKNLDLDGS QGHREWLTEV IFLGQLRHPH LVKLIGYCCE EDNRLLVYEY MPRGSLENQL FRRYSVSLPW STRMKIAIGA AKGLAFLHEA
201: KKPVIYRDFK ASNILLDSDY TAKLSDFGLA KDGPEGDDTH VSTRVMGTHG YAAPEYIMTG HLTAASDVYS FGVVLLELLT GRRSVDKGRP HREQNLVDWA
301: RPQLKDPRKL RRIMDPRLEG MYSEEGVQKA ALVAYQCLSH RPKARPDMSN VVTTLEPLKD YEDNSMVTFV YTAPTDDQQV KQITSASPHH HHQKQQHHNH
401: KRRSTPSSPT IHSETTIHKR LTPNSPLQNG FKRS

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.