Factsheet for Solyc08g061250.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033828	Potato	cytosol	96.57	97.46
KRH52268	Soybean	plastid	55.61	64.97
KRH05309	Soybean	plastid	57.21	64.77
KRH61599	Soybean	plasma membrane	55.61	63.95
KRH15727	Soybean	cytosol, mitochondrion, plastid	56.52	63.5
VIT_04s0008g02070.t01	Wine grape	cytosol	60.64	60.23
Solyc05g025820.2.1	Tomato	cytosol	54.23	58.09
Bra034302.1-P	Field mustard	plastid	54.92	56.6
Solyc07g041940.2.1	Tomato	cytosol, plastid	56.06	56.45
AT2G26290.1	Thale cress	mitochondrion	54.46	56.13
CDX77041	Canola	endoplasmic reticulum, plasma membrane	30.21	55.46
Solyc12g049360.1.1	Tomato	vacuole	52.4	54.65
CDY48175	Canola	plastid	24.03	53.85
Solyc06g062920.2.1	Tomato	plastid	55.61	52.37
Solyc01g028830.2.1	Tomato	plastid	45.08	51.04
Solyc12g009310.1.1	Tomato	cytosol	43.02	50.13
Solyc10g074710.1.1	Tomato	plastid	47.83	49.06
Solyc08g074980.2.1	Tomato	plastid	47.37	49.05
Solyc07g042590.2.1	Tomato	cytosol	44.16	43.67

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	UniProt:K4CKR5
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF15	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc08g061250.2
EnsemblPlants:Solyc08g061250.2.1	UniParc:UPI000276AC88	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:+:48305701..48307771

Molecular Weight (calculated)

49751.2 Da

IEP (calculated)

7.151

GRAVY (calculated)

-0.500

Length

437 amino acids

Sequence
(BLAST)

001: MTGERLSWKS MIPCCYKVDD EFVKSKKQVK KQTSFQRLTL LDFDDPSSPL SADELSNSFI GSSLINFTFT DLREVTHNFS SANFLGEGGF GPVYKGFVDD
101: KVRPGLKAQV VAVKVLDTDG LQGHKEWLTE IIFLGQLRHP HLVKLIGYCW EDDNRLLVYE FLPRGSLENQ LFGKFSITLS WSIRMKIALG AAKGLAFLHE
201: GDKPVIYRDF KASNILIDSD YTAKLSDFGL AKDGPEGDDT HVSTRIMGTH GYAAPEYIMT GHLTTMSDVY SFGVVLLELL TGKRSLDKSR REGEHNLVEW
301: LRPYLRDPKR IARVMDRRLE DEYPMKGAQT AALVAYKCLN HYPKPRPTMD DVVKILETLQ DENNNIDTSI SDPMITMTLS SDFSSGSEQN EDTAAPERNR
401: NNKYLNNERN QGYGWKHRLN RQRMVASYSD TALYRRH

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.