CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05309	Soybean	plastid	96.14	96.89
KRH52268	Soybean	plastid	79.43	82.62
KRH61599	Soybean	plasma membrane	79.43	81.32
VIT_04s0008g02070.t01	Wine grape	cytosol	70.18	62.05
Bra034302.1-P	Field mustard	plastid	61.95	56.84
AT2G26290.1	Thale cress	mitochondrion	61.95	56.84
PGSC0003DMT400033828	Potato	cytosol	63.24	56.81
Solyc08g061250.2.1	Tomato	cytosol	63.5	56.52
KRH19325	Soybean	nucleus	64.01	55.21
KRH12542	Soybean	cytosol	64.78	55.02
CDY48175	Canola	plastid	27.25	54.36
KRH37497	Soybean	plastid	64.52	54.21
KRH02603	Soybean	nucleus	63.5	54.17
CDX77041	Canola	endoplasmic reticulum, plasma membrane	32.9	53.78
KRH59124	Soybean	cytosol, mitochondrion	52.44	53.4
KRH06195	Soybean	plastid	61.44	52.99
KRH43007	Soybean	cytosol	51.16	52.23
KRH39720	Soybean	plastid	56.56	52.01
KRH47613	Soybean	plastid	61.18	51.4
KRH41391	Soybean	cytosol	49.36	50.66
KRH60107	Soybean	cytosol	49.36	50.66
KRH76414	Soybean	plastid	56.3	49.32
KRH13000	Soybean	cytosol	22.11	48.31
KRH40618	Soybean	cytosol	53.47	48.15
KRH07729	Soybean	cytosol	53.73	47.61
KRH00549	Soybean	cytosol	53.47	47.17
KRG93514	Soybean	cytosol	27.76	44.44
KRG93513	Soybean	plastid	38.3	37.72
KRG93548	Soybean	cytosol	38.3	33.26

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100802636	MapMan:18.4.1.37.1	MapMan:26.8.2.2.3	Gene3D:3.30.200.20	EMBL:ACUP02008633
EnsemblPlantsGene:GLYMA_14G107300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	UniProt:I1M9C6	InterPro:IPR000719	EnsemblPlants:KRH15727	ProteinID:KRH15727
ProteinID:KRH15727.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF15	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000233BC85	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:11365212..11368083

Molecular Weight (calculated)

43940.1 Da

IEP (calculated)

8.807

GRAVY (calculated)

-0.275

Length

389 amino acids

Sequence
(BLAST)

001: MNQMSTKRNT WKSVILILSC YKVKCSLEES EKQVLKQGSF QRLCLSDVSN SSSTQAIEDI SISFAGSKLY AFTLEELREA TNSFSWSNML GEGGFGPVYK
101: GFLDDKLRSG LKAQTIAVKR LDLDGLQGHR EWLAEIIFLG QLRHPHLVKL IGYCYEDEHR LLMYEYMPRG SLENQLFRKY SAAMPWSTRM KIALGAAKGL
201: TFLHEADKPV IYRDFKASNI LLDSDFTAKL SDFGLAKDGP EGEDTHVTTR IMGTQGYAAP EYIMTGHLTT KSDVYSYGVV LLELLTGRRV VDKSQSNGRK
301: SLVEWARPLL RDQKKVYSII DRRLEGQFPM KGAMKVAMLA FKCLSHHPNA RPSMSDVVKV LEPLQDYDDV FIGPFVYVAV SENGDKHKI

Best Arabidopsis Sequence Match ( AT2G05940.1 )
(BLAST)

001: MAVKKKVSWR SLIVGCLGDP ETLMASSKKP KRKNDVIKKQ SSFQRLSILD MSNPSSNTLS EDLSISLAGS DLHVFTLAEL KVITQSFSST NFLGEGGFGP
101: VHKGFIDDKL RPGLKAQPVA VKLLDLEGLQ GHREWLTEVM FLGQLKHKNL VKLIGYCCEE EHRTLVYEFM PRGSLENQLF RRYSASLPWS TRMKIAHGAA
201: TGLQFLHEAE NPVIYRDFKA SNILLDSDYT AKLSDFGLAK DGPEGDDTHV STRVMGTQGY AAPEYIMTGH LTARSDVYSF GVVLLELLTG RRSVDKKRSS
301: REQNLVDWAR PMLNDPRKLS RIMDPRLEGQ YSETGARKAA TLAYQCLSHR PKNRPCMSAV VSILNDLKDY NDIPMGTFTY TVPNTPDNKE DDGRVGNKPR
401: KSSHHHHHQQ QQSNHPRSSP SPTTKSPSPT AKSPRNSTEN HRRTLRNGVN SPLRSEAGGE RY

Arabidopsis Description

RIPKSerine/threonine-protein kinase RIPK [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.