CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH24006
KRH24392
KRH27971
KRH29310
KRH29374
KRH51475
KRH60786
KRH77487

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G61590.1	KRH24006	AT3G48150.1	21798944
AT1G61590.1	KRH27971	AT3G48150.1	21798944
AT1G61590.1	KRH29310	AT3G48150.1	21798944
AT1G61590.1	KRH77487	AT3G48150.1	21798944
AT1G61590.1	KRH24392	AT4G39050.1	21798944
AT1G61590.1	KRH29374	AT4G39050.1	21798944
AT1G61590.1	KRH51475	AT4G39050.1	21798944
AT1G61590.1	KRH60786	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65104	Canola	cytosol	28.47	73.53
CDY52677	Canola	cytosol	11.85	71.23
KRH39720	Soybean	plastid	64.92	67.38
KRH76414	Soybean	plastid	65.15	64.41
VIT_02s0087g00270.t01	Wine grape	plastid	61.05	63.21
CDY47586	Canola	plastid	57.63	60.67
AT1G61590.1	Thale cress	plastid	58.54	60.61
Bra031421.1-P	Field mustard	plastid	57.63	60.53
GSMUA_Achr2P17920_001	Banana	cytosol	51.94	59.69
Bra038591.1-P	Field mustard	plastid	57.63	59.67
CDY26353	Canola	plastid	57.18	59.2
CDY03843	Canola	plastid	41.0	58.44
KRH52268	Soybean	plastid	46.92	55.08
KRH05309	Soybean	plastid	48.29	54.92
KRH15727	Soybean	cytosol, mitochondrion, plastid	47.61	53.73
KRH61599	Soybean	plasma membrane	46.24	53.42
CDY52676	Canola	cytosol, nucleus, plastid	20.73	53.22
Zm00001d029258_P001	Maize	mitochondrion, plastid	51.71	52.55
OQU92552	Sorghum	plastid	52.16	52.4
HORVU6Hr1G032540.8	Barley	mitochondrion, plastid	51.03	52.09
Zm00001d047437_P001	Maize	plastid	51.94	51.82
Os03t0364400-01	Rice	plasma membrane	52.16	51.23
TraesCS6A01G024300.1	Wheat	cytosol	49.43	50.12
TraesCS4D01G166800.1	Wheat	cytosol	51.03	50.11
TraesCS4B01G162700.1	Wheat	cytosol	51.03	50.11
TraesCS6D01G027700.1	Wheat	cytosol	49.2	50.0
TraesCS6B01G033300.1	Wheat	cytosol	48.75	49.42
KRH40618	Soybean	cytosol	47.61	48.38
KRH59124	Soybean	cytosol, mitochondrion	41.91	48.17
KRH19325	Soybean	nucleus	49.43	48.12
KRH12542	Soybean	cytosol	50.11	48.03
KRH43007	Soybean	cytosol	41.69	48.03
KRH60107	Soybean	cytosol	41.46	48.02
KRH41391	Soybean	cytosol	41.23	47.76
KRH37497	Soybean	plastid	50.34	47.73
KRH00549	Soybean	cytosol	47.84	47.62
KRH02603	Soybean	nucleus	49.2	47.37
CDY65103	Canola	plastid	17.08	47.17
KRH06195	Soybean	plastid	47.38	46.12
KRG93514	Soybean	cytosol	25.06	45.27
KRH47613	Soybean	plastid	47.38	44.92
KRH13000	Soybean	cytosol	17.54	43.26
KRG93513	Soybean	plastid	34.62	38.48
KRG93548	Soybean	cytosol	34.85	34.15
CDY65105	Canola	cytosol	4.1	32.14

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100804970	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:ACUP02010085	EnsemblPlantsGene:GLYMA_16G106800
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	UniProt:K7MGC1	EnsemblPlants:KRH07729	ProteinID:KRH07729	ProteinID:KRH07729.1
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF495
InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000296AD31	:	:

Description

hypothetical protein

Coordinates

chr16:+:21636396..21641265

Molecular Weight (calculated)

49765.9 Da

IEP (calculated)

10.218

GRAVY (calculated)

-0.348

Length

439 amino acids

Sequence
(BLAST)

001: MILVLICYHQ QPNSTRHFFL HTMKHPSKPW KPLTTNCCTI QNQTIFGNLK PSSSDISNDI AQLPNSFHWM SFSDLGHFSS IRSNEDQIAK SFASDLYDFQ
101: LSDLRAITQN FSNSFWQGEG GFGTVHKGYI DANLRPGLKA QPVAVKILNV QGLQGHREWL AEVIFLGQLR HKNLVKLIGY CYEDEERLLI YEFMPRGSLE
201: NHLFRRKTSL PWATRLKITI GAAKGLAFLH AAKNPVIFRD FKTSNILLDS DFTAKLSDFG LARLVSEGSK SHVTTRVWGN YGYAAPEYIS KGHLTTKSDV
301: YSFGVVLIEL LTGRRAIDKK RPKTEQNLVD WSKPYLSNSK RLRCIMDPRL VGQYSVKGAK EMALLALQCT SLNPKDRPRI QTAVETLENL QKFKDMAVTY
401: GHWPQCARNG ASNKVKIDLR AGGNHKRLSP LVSGRTTWF

Best Arabidopsis Sequence Match ( AT1G61590.1 )
(BLAST)

001: MRDSSTTAST KSSPLWKPFA SNCCSVDDQT VFGNLSRCRP SRSEFSKNHL GPLPSFRRLS FADLSRSSSA RINEDLAQTL GADLVDFQMC ELKMITQSFS
101: GNYLLGEGGF GKVYKGYVDD YLRQSLKAQP VAVKLLDIEG LQGHREWLSE VIFLGQLKHP NLVKLIGYCC EEEERVLIYE FMPRGSLENH LFRRISLSLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW SKPYLTSSRR LRCVMDPRLA GQYSVKAAKD TALLALQCVS PNPKDRPKML AVVEALESLI HYKDMAVSSG HWPLSPKSQG
401: GKVSPKVRGD HRSGRKSAPG SLRS

Arabidopsis Description

PBL15Probable serine/threonine-protein kinase PBL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.