Factsheet for HORVU6Hr1G032540.8

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G027080.4
HORVU1Hr1G047110.10
HORVU6Hr1G062870.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G61590.1	HORVU0Hr1G027080.4	AT3G48150.1	21798944
AT1G61590.1	HORVU6Hr1G062870.1	AT3G48150.1	21798944
AT1G61590.1	HORVU1Hr1G047110.10	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G166800.1	Wheat	cytosol	95.12	91.5
TraesCS4B01G162700.1	Wheat	cytosol	93.95	90.38
Zm00001d029258_P001	Maize	mitochondrion, plastid	80.23	79.86
OQU92552	Sorghum	plastid	80.93	79.63
Os03t0364400-01	Rice	plasma membrane	82.33	79.19
HORVU0Hr1G014950.1	Barley	cytosol	23.72	77.86
Zm00001d047437_P001	Maize	plastid	78.84	77.05
CDY65104	Canola	cytosol	28.37	71.76
CDY52677	Canola	cytosol	11.63	68.49
GSMUA_Achr2P17920_001	Banana	cytosol	60.47	68.06
HORVU5Hr1G068890.1	Barley	cytosol, plasma membrane	6.74	67.44
VIT_02s0087g00270.t01	Wine grape	plastid	62.56	63.44
HORVU2Hr1G095950.2	Barley	cytosol	20.23	63.04
KRH39720	Soybean	plastid	60.93	61.94
Solyc08g074980.2.1	Tomato	plastid	59.53	60.66
PGSC0003DMT400040626	Potato	plastid	59.3	60.57
AT1G61590.1	Thale cress	plastid	59.3	60.14
Bra031421.1-P	Field mustard	plastid	57.44	59.09
CDY47586	Canola	plastid	57.21	58.99
KRH76414	Soybean	plastid	60.47	58.56
Bra038591.1-P	Field mustard	plastid	57.67	58.49
CDY26353	Canola	plastid	57.44	58.25
CDY03843	Canola	plastid	39.77	55.52
CDY52676	Canola	cytosol, nucleus, plastid	21.4	53.8
KRH07729	Soybean	cytosol	52.09	51.03
HORVU4Hr1G064260.3	Barley	plastid	45.58	50.13
HORVU7Hr1G088710.2	Barley	cytosol	29.3	49.22
HORVU5Hr1G046020.3	Barley	cytosol	46.98	49.15
HORVU5Hr1G061810.2	Barley	plastid	49.3	48.96
HORVU3Hr1G051820.4	Barley	plastid	49.3	48.74
HORVU5Hr1G061850.11	Barley	plastid	50.47	47.59
HORVU5Hr1G061760.2	Barley	plastid	49.07	47.42
HORVU4Hr1G023850.2	Barley	plastid	46.51	46.51
HORVU3Hr1G051830.5	Barley	plastid	50.0	45.84
HORVU7Hr1G108150.1	Barley	mitochondrion, peroxisome	47.44	45.74
HORVU4Hr1G073020.2	Barley	plastid	40.47	44.39
HORVU7Hr1G096400.1	Barley	peroxisome, plastid	37.44	44.11
CDY65103	Canola	plastid	16.28	44.03
HORVU5Hr1G061820.6	Barley	plasma membrane	49.3	42.15
HORVU0Hr1G012130.1	Barley	cytosol	22.56	41.1
CDY65105	Canola	cytosol	5.35	41.07
HORVU6Hr1G081330.2	Barley	nucleus, plastid	46.51	39.84
HORVU7Hr1G109590.5	Barley	plasma membrane	41.4	34.3
HORVU1Hr1G019770.1	Barley	cytosol	47.67	32.91
HORVU5Hr1G068790.1	Barley	cytosol	12.09	31.71
HORVU2Hr1G031710.1	Barley	cytosol	17.44	30.12

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	UniProt:A0A287TU09	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:HORVU6Hr1G032540	EnsemblPlants:HORVU6Hr1G032540.8	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF14	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B47E6F0	SEG:seg

Description

No Description!

Coordinates

chrchr6H:-:143073834..143075389

Molecular Weight (calculated)

46946.8 Da

IEP (calculated)

9.937

GRAVY (calculated)

-0.192

Length

430 amino acids

Sequence
(BLAST)

001: MPRPWRPVLA SATKCCSTED AVVAGNALTR CRPARSEFSR RLASFRRLSS MTNSPATPKD GKDDQAAGEM GVGPMQLHSF SLNELRGVTH DFSSGYLLGE
101: GGFGTVHKGF VDAGMRPGLE PQPVAVKQLD IAGHQGHREW LAEVIFLGQF RDQHLVKLLG YCCEDEERLL VYEFMPRGSL ENHLFKRISA TLPWGTRLKV
201: AIGAAKGLAF LHGAKQPVIY RDFKASNILL DSVEDFTAKL SDFGLAKMGP EGEDTHVTTR VMGTHGYAAP EYVQTGHLTM KSDVYSFGVV LLELLTGRRA
301: MEHVRGRSVH AEQTIKLVEW TRPYLASSRR LRCIMDPKLA GHYSVKGARA VAHLAVQCTS AQPRDRPSMT VVVGALERLE GLKDMAVSIG LWPTAPVAGR
401: NAVSAKIRTE MKGAGAGVVL RQRSASAKLS

Best Arabidopsis Sequence Match ( AT1G61590.1 )
(BLAST)

001: MRDSSTTAST KSSPLWKPFA SNCCSVDDQT VFGNLSRCRP SRSEFSKNHL GPLPSFRRLS FADLSRSSSA RINEDLAQTL GADLVDFQMC ELKMITQSFS
101: GNYLLGEGGF GKVYKGYVDD YLRQSLKAQP VAVKLLDIEG LQGHREWLSE VIFLGQLKHP NLVKLIGYCC EEEERVLIYE FMPRGSLENH LFRRISLSLP
201: WATRLKIAVA AAKGLAFLHD LESPIIYRDF KTSNILLDSD FTAKLSDFGL AKMGPEGSKS HVTTRVMGTY GYAAPEYVST GHLTTKSDVY SYGVVLLELL
301: TGRRATEKSR PKNQQNIIDW SKPYLTSSRR LRCVMDPRLA GQYSVKAAKD TALLALQCVS PNPKDRPKML AVVEALESLI HYKDMAVSSG HWPLSPKSQG
401: GKVSPKVRGD HRSGRKSAPG SLRS

Arabidopsis Description

PBL15Probable serine/threonine-protein kinase PBL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.