Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G233200.1 | Wheat | cytosol | 89.68 | 97.16 |
| TraesCS6B01G273900.1 | Wheat | cytosol | 88.91 | 96.33 |
| TraesCS6A01G251400.1 | Wheat | cytosol | 88.75 | 96.16 |
| Os02t0656300-01 | Rice | cytosol | 82.9 | 90.12 |
| Zm00001d017475_P002 | Maize | cytosol | 82.43 | 89.32 |
| EES07517 | Sorghum | cytosol | 81.51 | 88.17 |
| HORVU0Hr1G027080.4 | Barley | plastid | 81.2 | 87.83 |
| VIT_07s0130g00490.t01 | Wine grape | cytosol | 63.17 | 71.06 |
| GSMUA_Achr11P... | Banana | cytosol | 65.79 | 70.7 |
| VIT_07s0031g02330.t01 | Wine grape | cytosol | 62.25 | 70.02 |
| Solyc03g113740.2.1 | Tomato | cytosol, mitochondrion | 60.71 | 68.4 |
| KRH27971 | Soybean | nucleus | 60.71 | 68.28 |
| KRH77487 | Soybean | nucleus | 60.71 | 68.17 |
| PGSC0003DMT400063189 | Potato | cytosol | 57.01 | 68.01 |
| Os06t0679100-00 | Rice | plastid | 18.34 | 66.85 |
| AT3G48150.1 | Thale cress | cytosol | 58.86 | 65.98 |
| Bra033769.1-P | Field mustard | nucleus | 58.71 | 65.92 |
| Bra018081.1-P | Field mustard | cytosol | 57.78 | 64.77 |
| KRH24006 | Soybean | cytosol | 58.4 | 64.35 |
| CDY58070 | Canola | cytosol | 48.07 | 63.03 |
| CDY70805 | Canola | nucleus | 28.51 | 61.46 |
| CDY44976 | Canola | cytosol | 47.61 | 61.19 |
| CDY36901 | Canola | cytosol | 46.84 | 60.68 |
| CDY58069 | Canola | nucleus | 38.98 | 56.73 |
| KRH29310 | Soybean | cytosol | 24.04 | 48.75 |
| HORVU7Hr1G093620.9 | Barley | cytosol | 17.41 | 15.01 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.3.4.1.1.2.4 | UniProt:A0A287UF18 | InterPro:APC8 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005680 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030071 |
| EnsemblPlantsGene:HORVU6Hr1G062870 | EnsemblPlants:HORVU6Hr1G062870.1 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF04049 |
| PFAM:PF13176 | PFAM:PF13181 | PFAM:PF13414 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR12558 |
| PANTHER:PTHR12558:SF10 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI000B46D680 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:421701952..421706133
Molecular Weight (calculated)
73757.9 Da
IEP (calculated)
7.035
GRAVY (calculated)
-0.388
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: SNQSSPPNAK ISDPPHCIFS PLPWQFQNSL RSHCADPLQI SHPASPYRRM AAAKENYRVE LRAAARQLGD RCLYSAAKWA AELLVGIEPD AAPSQSAAMG
101: TPSSSGAAPG ERLLHLYRSG GSSFRCRTRH GGGGGAAEAG TPLGGVSYVS TPIPDDDAFD AGADKYLLAK TYFDCREYRR AAHVLRSQVG RKAVFLRCYA
201: LYMAGEKRKE EETIELEGSL GKSNVVNKEL VALERELSTH RRTGAIDSFG LYLYGIVLRD KGCEGMARTV LVESVNSYPW NWCAWLEIQS LCTSSDILNN
301: LNLKNHWMKD FFIASAHLEL KMHEEALKRY ERLMGVFHCS DYIQAQIATV QYSMRDLDEA DMIFEELLRT DPFRVDSMDI YSNLLYAKES LTALSFLAHR
401: VFLTDKYRPE SCCIIANYYS LKGQHEKSVL YFQRALKLNR KYLSAWTLMG HEFVELKNTP AAIDAYRRAV DINPRDYRAW YGLGQIYEMM GMPFYALYYF
501: RKSSHLQPND ARLWIAMAQC YESDPLQMIE EAIKCYERAA NTNDTEGIAL HQLAKLHSML GQAEEAAFYY KKDLERMEVE ERQGQNFVEA LLFLARHCKN
601: MGRFEEAEHY CTRLLDYTGP EKETAKSILQ GLKRAQSGFP PMDIDHFAL
101: TPSSSGAAPG ERLLHLYRSG GSSFRCRTRH GGGGGAAEAG TPLGGVSYVS TPIPDDDAFD AGADKYLLAK TYFDCREYRR AAHVLRSQVG RKAVFLRCYA
201: LYMAGEKRKE EETIELEGSL GKSNVVNKEL VALERELSTH RRTGAIDSFG LYLYGIVLRD KGCEGMARTV LVESVNSYPW NWCAWLEIQS LCTSSDILNN
301: LNLKNHWMKD FFIASAHLEL KMHEEALKRY ERLMGVFHCS DYIQAQIATV QYSMRDLDEA DMIFEELLRT DPFRVDSMDI YSNLLYAKES LTALSFLAHR
401: VFLTDKYRPE SCCIIANYYS LKGQHEKSVL YFQRALKLNR KYLSAWTLMG HEFVELKNTP AAIDAYRRAV DINPRDYRAW YGLGQIYEMM GMPFYALYYF
501: RKSSHLQPND ARLWIAMAQC YESDPLQMIE EAIKCYERAA NTNDTEGIAL HQLAKLHSML GQAEEAAFYY KKDLERMEVE ERQGQNFVEA LLFLARHCKN
601: MGRFEEAEHY CTRLLDYTGP EKETAKSILQ GLKRAQSGFP PMDIDHFAL
001: MVSKECCRNE IRAAIRQLSD RCLYSAAKWA GEQLVGIEQD PSNFTPANTR FQRGSSSIRR RFSTNESIST PLPSVGFSQA ATPLPEEDEA IDGDIYLLAK
101: SYFDCREYRR ASHMLRDQVS KKSLFLRYYA LYLAGEKRKE EEMIELEGPL GKSDAINREL VSLERDLSAL RRTGAIDSFG LYLYGVVLKE KGNESLARAS
201: LVESVNSYPW NWSAWSELQS LCTSIEILNS LNLNNHWMKE FFLGNAYQEL RMHTESLAKY EYLQGIFSFS NYIQAQTAKA QYSLREFDQV EIMFEELLRN
301: DPYRVEDMDL YSNVLYAKEA CAALSYLAHK VFLTDKYRPE SCCIIGNYYS LKGQHEKAVM YFRRALKLNK KYLSAWTLMG HEYVEMKNTP AAIDAYRRAV
401: DINPTDYRAW YGLGQAYEMM GMPFYALHYF RKSIFFLPND SRLWIAMAKC YQTEQLYMLE EAIKCYKRAV NCTDTEGIAL NQLAKLHQKL GRNEEAAYYF
501: EKDLERMDAE GLEGPNMFEA LVFLATHFKN HKKFEEAEVY CTRLLDYSGP EKEKAKSLLR GIRMAQTGFP SMDLEHFPI
101: SYFDCREYRR ASHMLRDQVS KKSLFLRYYA LYLAGEKRKE EEMIELEGPL GKSDAINREL VSLERDLSAL RRTGAIDSFG LYLYGVVLKE KGNESLARAS
201: LVESVNSYPW NWSAWSELQS LCTSIEILNS LNLNNHWMKE FFLGNAYQEL RMHTESLAKY EYLQGIFSFS NYIQAQTAKA QYSLREFDQV EIMFEELLRN
301: DPYRVEDMDL YSNVLYAKEA CAALSYLAHK VFLTDKYRPE SCCIIGNYYS LKGQHEKAVM YFRRALKLNK KYLSAWTLMG HEYVEMKNTP AAIDAYRRAV
401: DINPTDYRAW YGLGQAYEMM GMPFYALHYF RKSIFFLPND SRLWIAMAKC YQTEQLYMLE EAIKCYKRAV NCTDTEGIAL NQLAKLHQKL GRNEEAAYYF
501: EKDLERMDAE GLEGPNMFEA LVFLATHFKN HKKFEEAEVY CTRLLDYSGP EKEKAKSLLR GIRMAQTGFP SMDLEHFPI
Arabidopsis Description
APC8Anaphase-promoting complex subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9STS3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.