Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07517 | Sorghum | cytosol | 95.16 | 95.0 |
| TraesCS6D01G233200.1 | Wheat | cytosol | 90.48 | 90.48 |
| TraesCS6B01G273900.1 | Wheat | cytosol | 89.82 | 89.82 |
| TraesCS6A01G251400.1 | Wheat | cytosol | 89.82 | 89.82 |
| Os02t0656300-01 | Rice | cytosol | 87.98 | 88.27 |
| HORVU6Hr1G062870.1 | Barley | cytosol, plastid | 89.32 | 82.43 |
| HORVU0Hr1G027080.4 | Barley | plastid | 80.47 | 80.33 |
| VIT_07s0130g00490.t01 | Wine grape | cytosol | 68.45 | 71.06 |
| GSMUA_Achr11P... | Banana | cytosol | 71.45 | 70.86 |
| VIT_07s0031g02330.t01 | Wine grape | cytosol | 67.45 | 70.02 |
| Solyc03g113740.2.1 | Tomato | cytosol, mitochondrion | 65.61 | 68.23 |
| Os06t0679100-00 | Rice | plastid | 20.2 | 67.98 |
| KRH27971 | Soybean | nucleus | 65.44 | 67.94 |
| PGSC0003DMT400063189 | Potato | cytosol | 61.44 | 67.65 |
| KRH77487 | Soybean | nucleus | 65.11 | 67.47 |
| Bra033769.1-P | Field mustard | nucleus | 63.44 | 65.74 |
| AT3G48150.1 | Thale cress | cytosol | 63.44 | 65.63 |
| Bra018081.1-P | Field mustard | cytosol | 63.11 | 65.28 |
| KRH24006 | Soybean | cytosol | 62.1 | 63.16 |
| CDY58070 | Canola | cytosol | 51.92 | 62.83 |
| CDY70805 | Canola | nucleus | 31.22 | 62.13 |
| CDY44976 | Canola | cytosol | 52.09 | 61.78 |
| CDY36901 | Canola | cytosol | 51.09 | 61.08 |
| CDY58069 | Canola | nucleus | 42.74 | 57.4 |
| KRH29310 | Soybean | cytosol | 25.71 | 48.12 |
| Zm00001d042523_P001 | Maize | cytosol | 19.7 | 15.71 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.3.4.1.1.2.4 | InterPro:APC8 | ProteinID:AQK73231.1 | ProteinID:AQK73235.1 | EMBL:BT085667 |
| UniProt:C4J4C0 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 | GO:GO:0006950 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030071 | GO:GO:0031347 | GO:GO:0051301 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF04049 | PFAM:PF13181 | PFAM:PF13414 |
| PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR12558 | PANTHER:PTHR12558:SF10 | SMART:SM00028 | SUPFAM:SSF48452 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0001A4C589 | EnsemblPlantsGene:Zm00001d017475 | EnsemblPlants:Zm00001d017475_P002 |
| EnsemblPlants:Zm00001d017475_T002 | SEG:seg | : | : | : | : |
Description
Anaphase-promoting complex subunit 8
Coordinates
chr5:+:197045577..197051258
Molecular Weight (calculated)
68122.2 Da
IEP (calculated)
6.787
GRAVY (calculated)
-0.362
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAKESYRA ELRASSRQLS ERCLYSAAKW AAELLVGVEL DAAPVPSAAM DSPSSSSAAS AGRLLHLHRS GGSSFRHRPR PGGGSSSEAG TPLGGVSYVS
101: TPIPDDDAFD SGGDKYLLAK TYFDCREYRR AAHVLQNQVG RKAVFLRCYA LYMAGEKRKE AEMIELEGSL GKSNAVNQEL VALEKELSTH RRTGSIDSFG
201: LYLYGIVLRD KGCEGLARTI LVESVNTYPW NWSAWSELQS LCTSSDILNN LNLKNHWMKD FFLASAYLEL KMHEEALKRY ERLMGVFRCS GYIQAQIATV
301: QYSMRDLDEA EMIFEELLRT DPFRVDSMDI YSNLLYAKES LTALSFLAHR VFLTDKYRPE SCCIIANYYS LKGQHEKSVL YFQRALKLNR KYLSAWTLMG
401: HEYVELKNSP AAIDAYRRAV DINPRDFRAL YGLGQIYEMM GMPFYALYYF RKSSYLQPND ARLWIAMAQC YESDPLQMIE EAIKCYERAA NSNDTEGIAL
501: HQLAKLHGML GQSEEAAFYY KKDLERMEVE ERQGQNFVEA LLFLAKHYKS IGRFEDAEHY CTRLLDYTGP EKETAKNMLQ GIKRLQSGFP SMDIDHFAL
101: TPIPDDDAFD SGGDKYLLAK TYFDCREYRR AAHVLQNQVG RKAVFLRCYA LYMAGEKRKE AEMIELEGSL GKSNAVNQEL VALEKELSTH RRTGSIDSFG
201: LYLYGIVLRD KGCEGLARTI LVESVNTYPW NWSAWSELQS LCTSSDILNN LNLKNHWMKD FFLASAYLEL KMHEEALKRY ERLMGVFRCS GYIQAQIATV
301: QYSMRDLDEA EMIFEELLRT DPFRVDSMDI YSNLLYAKES LTALSFLAHR VFLTDKYRPE SCCIIANYYS LKGQHEKSVL YFQRALKLNR KYLSAWTLMG
401: HEYVELKNSP AAIDAYRRAV DINPRDFRAL YGLGQIYEMM GMPFYALYYF RKSSYLQPND ARLWIAMAQC YESDPLQMIE EAIKCYERAA NSNDTEGIAL
501: HQLAKLHGML GQSEEAAFYY KKDLERMEVE ERQGQNFVEA LLFLAKHYKS IGRFEDAEHY CTRLLDYTGP EKETAKNMLQ GIKRLQSGFP SMDIDHFAL
001: MVSKECCRNE IRAAIRQLSD RCLYSAAKWA GEQLVGIEQD PSNFTPANTR FQRGSSSIRR RFSTNESIST PLPSVGFSQA ATPLPEEDEA IDGDIYLLAK
101: SYFDCREYRR ASHMLRDQVS KKSLFLRYYA LYLAGEKRKE EEMIELEGPL GKSDAINREL VSLERDLSAL RRTGAIDSFG LYLYGVVLKE KGNESLARAS
201: LVESVNSYPW NWSAWSELQS LCTSIEILNS LNLNNHWMKE FFLGNAYQEL RMHTESLAKY EYLQGIFSFS NYIQAQTAKA QYSLREFDQV EIMFEELLRN
301: DPYRVEDMDL YSNVLYAKEA CAALSYLAHK VFLTDKYRPE SCCIIGNYYS LKGQHEKAVM YFRRALKLNK KYLSAWTLMG HEYVEMKNTP AAIDAYRRAV
401: DINPTDYRAW YGLGQAYEMM GMPFYALHYF RKSIFFLPND SRLWIAMAKC YQTEQLYMLE EAIKCYKRAV NCTDTEGIAL NQLAKLHQKL GRNEEAAYYF
501: EKDLERMDAE GLEGPNMFEA LVFLATHFKN HKKFEEAEVY CTRLLDYSGP EKEKAKSLLR GIRMAQTGFP SMDLEHFPI
101: SYFDCREYRR ASHMLRDQVS KKSLFLRYYA LYLAGEKRKE EEMIELEGPL GKSDAINREL VSLERDLSAL RRTGAIDSFG LYLYGVVLKE KGNESLARAS
201: LVESVNSYPW NWSAWSELQS LCTSIEILNS LNLNNHWMKE FFLGNAYQEL RMHTESLAKY EYLQGIFSFS NYIQAQTAKA QYSLREFDQV EIMFEELLRN
301: DPYRVEDMDL YSNVLYAKEA CAALSYLAHK VFLTDKYRPE SCCIIGNYYS LKGQHEKAVM YFRRALKLNK KYLSAWTLMG HEYVEMKNTP AAIDAYRRAV
401: DINPTDYRAW YGLGQAYEMM GMPFYALHYF RKSIFFLPND SRLWIAMAKC YQTEQLYMLE EAIKCYKRAV NCTDTEGIAL NQLAKLHQKL GRNEEAAYYF
501: EKDLERMDAE GLEGPNMFEA LVFLATHFKN HKKFEEAEVY CTRLLDYSGP EKEKAKSLLR GIRMAQTGFP SMDLEHFPI
Arabidopsis Description
APC8Anaphase-promoting complex subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9STS3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.