Factsheet for Zm00001d040015_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038666_P002	Maize	cytosol	71.63	71.63
Zm00001d035596_P001	Maize	cytosol	94.33	66.17
Zm00001d052072_P003	Maize	cytosol	92.91	16.75
EES05908	Sorghum	cytosol	85.82	15.71
TraesCSU01G081200.2	Wheat	cytosol	79.43	14.45
TraesCS6D01G327000.1	Wheat	cytosol	78.72	14.34
TraesCS6B01G377000.1	Wheat	cytosol	78.01	14.18
GSMUA_Achr10P...	Banana	cytosol	9.22	13.13
GSMUA_Achr10P...	Banana	extracellular, golgi	41.84	12.07
VIT_00s0181g00190.t01	Wine grape	cytosol	36.88	11.9
VIT_00s0181g00210.t01	Wine grape	cytosol	56.03	10.25
KRH49954	Soybean	cytosol	52.48	9.52
AT4G21530.1	Thale cress	cytosol	50.35	9.14
Bra013534.1-P	Field mustard	cytosol	48.23	8.8
CDX79070	Canola	cytosol	48.23	8.8
Solyc02g079050.2.1	Tomato	mitochondrion	47.52	8.71
CDX82833	Canola	cytosol	47.52	8.67
Zm00001d045047_P002	Maize	nucleus, plastid	9.22	8.67
GSMUA_Achr10P...	Banana	mitochondrion	3.55	2.11
Zm00001d052917_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d040015_P001	EnsemblPlants:Zm00001d040015_T001	EnsemblPlantsGene:Zm00001d040015	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005680	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0030071	GO:GO:0031145	InterPro:APC4
PANTHER:PTHR13260	ProteinID:ONM30303.1	UniParc:UPI0002208BDD	UniProt:A0A1D6MM70	MapMan:13.3.4.1.1.1.2	:

Description

Anaphase-promoting complex subunit 4

Coordinates

chr3:+:23009613..23011033

Molecular Weight (calculated)

15436.1 Da

IEP (calculated)

4.261

GRAVY (calculated)

-0.348

Length

141 amino acids

Sequence
(BLAST)

001: MAEEQIEEAS MAAAAVTPFQ LQFDKPTSFQ NGKMLRTTKS HDVAIVSLNW AEDDPLSKSD KDEFLSYEDR TTRFFPPPVM PRIGGLRSGD TGLADENEEA
101: IPEFSNASCQ RFNIVCSGGK DGCVCFSIFG IFPVGKIGTD N

Best Arabidopsis Sequence Match ( AT4G21530.1 )
(BLAST)

001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK

Arabidopsis Description

APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.