Factsheet for GSMUA_Achr10P05630_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052917_P001	Maize	cytosol	57.58	69.51
Os02t0785900-00	Rice	cytosol	73.74	50.34
Zm00001d045047_P002	Maize	nucleus, plastid	50.51	33.33
EES05908	Sorghum	cytosol	73.74	9.48
TraesCSU01G081200.2	Wheat	cytosol	73.74	9.42
TraesCS6B01G377000.1	Wheat	cytosol	73.74	9.41
Zm00001d052072_P003	Maize	cytosol	73.74	9.34
TraesCS6D01G327000.1	Wheat	cytosol	72.73	9.3
Zm00001d040015_P001	Maize	cytosol	13.13	9.22
Solyc02g079050.2.1	Tomato	mitochondrion	70.71	9.1
AT4G21530.1	Thale cress	cytosol	70.71	9.01
VIT_00s0181g00210.t01	Wine grape	cytosol	69.7	8.95
CDX82833	Canola	cytosol	68.69	8.8
CDX79070	Canola	cytosol	68.69	8.8
Bra013534.1-P	Field mustard	cytosol	68.69	8.8
KRH49954	Soybean	cytosol	67.68	8.62
Zm00001d035596_P001	Maize	cytosol	15.15	7.46
GSMUA_Achr10P...	Banana	extracellular, golgi	8.08	1.64
GSMUA_Achr10P...	Banana	mitochondrion	1.01	0.42
VIT_00s0181g00190.t01	Wine grape	cytosol	0.0	0.0
Zm00001d038666_P002	Maize	cytosol	0.0	0.0

Protein Annotations

MapMan:13.3.4.1.1.1.2	Gene3D:2.130.10.10	InterPro:APC4	InterPro:Apc4_WD40_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005680
GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016043
GO:GO:0019538	GO:GO:0030071	GO:GO:0031145	EnsemblPlantsGene:GSMUA_Achr10G05630_001	EnsemblPlants:GSMUA_Achr10P05630_001	EnsemblPlants:GSMUA_Achr10T05630_001
InterPro:IPR015943	UniProt:M0RFP0	PFAM:PF12894	PANTHER:PTHR13260	SUPFAM:SSF50978	UniParc:UPI000294C939
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat_dom_sf	:	:	:	:

Description

Anaphase-promoting complex subunit 4 [Source:GMGC_GENE;Acc:GSMUA_Achr10G05630_001]

Coordinates

chr10:-:15960314..15965822

Molecular Weight (calculated)

11224.7 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.063

Length

99 amino acids

Sequence
(BLAST)

1: METAAGAVPV PFQLQLDKSI PFQINIAEWN PEKDLLAMVT EDSKVVLHRF NWQRLWMISP GKCITSLCWR PDGKVIALGL EDGSILLHDV EVGIRNKQR

Best Arabidopsis Sequence Match ( AT4G21530.1 )
(BLAST)

001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK

Arabidopsis Description

APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.