Factsheet for Os02t0785900-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052917_P001	Maize	cytosol	43.45	76.83
GSMUA_Achr10P...	Banana	cytosol	50.34	73.74
Zm00001d045047_P002	Maize	nucleus, plastid	45.52	44.0
EES05908	Sorghum	cytosol	84.83	15.97
TraesCS6B01G377000.1	Wheat	cytosol	83.45	15.59
TraesCS6D01G327000.1	Wheat	cytosol	82.76	15.5
TraesCSU01G081200.2	Wheat	cytosol	82.76	15.48
VIT_00s0181g00210.t01	Wine grape	cytosol	64.83	12.19
AT4G21530.1	Thale cress	cytosol	64.83	12.1
Bra013534.1-P	Field mustard	cytosol	62.76	11.77
CDX82833	Canola	cytosol	62.76	11.77
CDX79070	Canola	cytosol	62.76	11.77
Solyc02g079050.2.1	Tomato	mitochondrion	62.07	11.7
KRH49954	Soybean	cytosol	60.69	11.33
GSMUA_Achr10P...	Banana	extracellular, golgi	15.17	4.5
GSMUA_Achr10P...	Banana	mitochondrion	6.21	3.8
VIT_00s0181g00190.t01	Wine grape	cytosol	1.38	0.46

Protein Annotations

MapMan:13.3.4.1.1.1.2	Gene3D:2.130.10.10	UniProt:A0A0P0VQD8	InterPro:APC4	InterPro:Apc4_WD40_dom	ProteinID:BAS81269.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005680	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0019538	GO:GO:0030071
GO:GO:0031145	InterPro:IPR001680	InterPro:IPR015943	EnsemblPlantsGene:Os02g0785900	EnsemblPlants:Os02t0785900-00	PFAM:PF12894
PANTHER:PTHR13260	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000393A533	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_dom_sf	:	:	:	:	:

Description

ANAPHASE PROMOTING COMPLEX 4Similar to nucleotide binding. (Os02t0785900-00)

Coordinates

chr2:+:33361926..33371022

Molecular Weight (calculated)

16514.1 Da

IEP (calculated)

4.950

GRAVY (calculated)

-0.009

Length

145 amino acids

Sequence
(BLAST)

001: MAEEQMEEAS TAGAAATPFQ LQFDKPIPFQ IKMAEWNPEK DLLAMVTDDS KVVLHRFNWQ RLWTISPGKC ITSICWSPDG KIVALGTEDG LVLLHDVENG
101: KMLRRIKSHD VAIVCLNWAE DELLSRVYHC LFHLLETPTI SLYIM

Best Arabidopsis Sequence Match ( AT4G21530.1 )
(BLAST)

001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK

Arabidopsis Description

APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.