Factsheet for GSMUA_Achr10P05610_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g079050.2.1	Tomato	mitochondrion	44.73	13.78
VIT_00s0181g00210.t01	Wine grape	cytosol	41.35	12.71
TraesCSU01G081200.2	Wheat	cytosol	40.51	12.39
EES05908	Sorghum	cytosol	39.66	12.21
TraesCS6B01G377000.1	Wheat	cytosol	39.66	12.11
TraesCS6D01G327000.1	Wheat	cytosol	38.82	11.89
KRH49954	Soybean	cytosol	38.82	11.84
Zm00001d052072_P003	Maize	cytosol	38.82	11.76
AT4G21530.1	Thale cress	cytosol	36.29	11.07
CDX79070	Canola	cytosol	35.02	10.74
Bra013534.1-P	Field mustard	cytosol	34.6	10.61
CDX82833	Canola	cytosol	34.6	10.61
Zm00001d038666_P002	Maize	cytosol	3.8	6.38
Os02t0785900-00	Rice	cytosol	3.8	6.21
Zm00001d035596_P001	Maize	cytosol	4.64	5.47
Zm00001d040015_P001	Maize	cytosol	2.11	3.55
GSMUA_Achr10P...	Banana	extracellular, golgi	2.53	1.23
Zm00001d052917_P001	Maize	cytosol	0.42	1.22
VIT_00s0181g00190.t01	Wine grape	cytosol	2.11	1.14
GSMUA_Achr10P...	Banana	cytosol	0.42	1.01
Zm00001d045047_P002	Maize	nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr10P05610_001

EnsemblPlants:GSMUA_Achr10T05610_001

EnsemblPlantsGene:GSMUA_Achr10G05610_001

UniParc:UPI00029686C1

UniProt:M0RFN8

MapMan:13.3.4.1.1.1.2

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G05610_001]

Coordinates

chr10:-:15882832..15895991

Molecular Weight (calculated)

26369.5 Da

IEP (calculated)

5.093

GRAVY (calculated)

-0.070

Length

237 amino acids

Sequence
(BLAST)

001: MIKNQSSHWR ISNIRRSSPP TTDKEALSYG MSFCFPNSGW RQTHIVLSAA NRVGDHGATS EVCTDGDSRV DYICFKVPDE SLELTNCIGI IRGFANGLDP
101: VQKRVTSPEA ILLCIPDAFQ CIDLSLYKEN QIVLLLNEAT STSESTMRSL VMMVQISDFC FLPLSRRTPA NLWTLQILKA SAVDMHLEIG KVRYISEPVT
201: SPLAVSASRG LACVFTSRRH AMVYILDEDE DETSDID

Best Arabidopsis Sequence Match ( AT4G21530.1 )
(BLAST)

001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK

Arabidopsis Description

APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.