Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052072_P003 | Maize | cytosol | 90.39 | 89.0 |
| Zm00001d040015_P001 | Maize | cytosol | 15.71 | 85.82 |
| Os02t0785900-00 | Rice | cytosol | 15.97 | 84.83 |
| TraesCSU01G081200.2 | Wheat | cytosol | 79.87 | 79.35 |
| TraesCS6D01G327000.1 | Wheat | cytosol | 79.48 | 79.07 |
| TraesCS6B01G377000.1 | Wheat | cytosol | 79.48 | 78.87 |
| GSMUA_Achr10P... | Banana | cytosol | 9.48 | 73.74 |
| Zm00001d038666_P002 | Maize | cytosol | 12.34 | 67.38 |
| Zm00001d035596_P001 | Maize | cytosol | 17.4 | 66.67 |
| GSMUA_Achr10P... | Banana | extracellular, golgi | 33.9 | 53.37 |
| Solyc02g079050.2.1 | Tomato | mitochondrion | 52.86 | 52.93 |
| VIT_00s0181g00210.t01 | Wine grape | cytosol | 52.86 | 52.79 |
| VIT_00s0181g00190.t01 | Wine grape | cytosol | 29.09 | 51.26 |
| AT4G21530.1 | Thale cress | cytosol | 51.56 | 51.09 |
| CDX82833 | Canola | cytosol | 51.04 | 50.84 |
| CDX79070 | Canola | cytosol | 51.04 | 50.84 |
| Bra013534.1-P | Field mustard | cytosol | 51.04 | 50.84 |
| KRH49954 | Soybean | cytosol | 51.04 | 50.58 |
| GSMUA_Achr10P... | Banana | mitochondrion | 12.21 | 39.66 |
Protein Annotations
| MapMan:13.3.4.1.1.1.2 | InterPro:APC4 | InterPro:APC4_long_dom | InterPro:Apc4_WD40_dom | UniProt:C5XTP9 | EnsemblPlants:EES05908 |
| ProteinID:EES05908 | ProteinID:EES05908.2 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 | GO:GO:0007049 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009793 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0030071 |
| GO:GO:0031145 | GO:GO:0048481 | InterPro:IPR001680 | PFAM:PF12894 | PFAM:PF12896 | PFscan:PS50082 |
| PANTHER:PTHR13260 | SMART:SM00320 | EnsemblPlantsGene:SORBI_3004G322300 | SUPFAM:SSF50978 | UniParc:UPI0007F238A9 | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:65712316..65721714
Molecular Weight (calculated)
85224.8 Da
IEP (calculated)
4.563
GRAVY (calculated)
-0.001
Length
770 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEEQMEEAS TAPAAATPFQ LQFDKPIPFQ IKLAEWNPEK DLLAMVTDDS KVILHRFNWQ RLWTISPGKC ITSICWSPDG KIIALGTEDG LVLLHDVENG
101: KMLRTTKSHD VAIVCLNWAE DDPLSRPEKD EFLSYEDRTT RFFPPAPVMP RVGGLSSGDT GLADENEEAI PEFFSASCQR FNILCSGGKD GCVCFSIFGI
201: FPVGKINITK IPINVGSSGK SYQLQDASVS EVSLSRNLQK LVLLCFGKLV DTDNLSHSCG SSGLHCLYLD TSIFFNRKNE LHQVSQQASS IQDLVEVVRA
301: SVSLISKQWS NAMGLFRVQF SALPNLISAH GVESTSEDEF LSLLFGTRTS PALHQFLASS LGEAGLKRIA KAVDSAGRDI RGIITEHLQP AVEMISFRLS
401: ELRGLARWRS RFQIIGLDEK LIDGVTESIG MLVVQVERFS RVAATVVYLF QNFFAWVLKS VKILLNEPTD QVPAANSELV VIFLKFLLDK DPIKQLLEAD
501: EIIECDMDTA RHVEQLVVFG GFTDTQFLEK SLVKQFNELE DSLKEAFLMP FTTISSQIQC QGLLPLYPVT SSVNLSSSCT PTSISFYKDE DSPHGESSYS
601: LTDYVCFKIP DGSLNKRNCI GVIKDSGNCC TALSMASLSG FLLHIPDEYE CVDLSLYKDN QVVLLLSETS CSDSPGKSWM VMLQTENFSF MPLSGTFPAN
701: IYSLQKLVAL DLQLDADYGK VRSIPHTVST PLAVSASRGV ACVFSSRRHA LVYILDEDEE EEGDEISDME
101: KMLRTTKSHD VAIVCLNWAE DDPLSRPEKD EFLSYEDRTT RFFPPAPVMP RVGGLSSGDT GLADENEEAI PEFFSASCQR FNILCSGGKD GCVCFSIFGI
201: FPVGKINITK IPINVGSSGK SYQLQDASVS EVSLSRNLQK LVLLCFGKLV DTDNLSHSCG SSGLHCLYLD TSIFFNRKNE LHQVSQQASS IQDLVEVVRA
301: SVSLISKQWS NAMGLFRVQF SALPNLISAH GVESTSEDEF LSLLFGTRTS PALHQFLASS LGEAGLKRIA KAVDSAGRDI RGIITEHLQP AVEMISFRLS
401: ELRGLARWRS RFQIIGLDEK LIDGVTESIG MLVVQVERFS RVAATVVYLF QNFFAWVLKS VKILLNEPTD QVPAANSELV VIFLKFLLDK DPIKQLLEAD
501: EIIECDMDTA RHVEQLVVFG GFTDTQFLEK SLVKQFNELE DSLKEAFLMP FTTISSQIQC QGLLPLYPVT SSVNLSSSCT PTSISFYKDE DSPHGESSYS
601: LTDYVCFKIP DGSLNKRNCI GVIKDSGNCC TALSMASLSG FLLHIPDEYE CVDLSLYKDN QVVLLLSETS CSDSPGKSWM VMLQTENFSF MPLSGTFPAN
701: IYSLQKLVAL DLQLDADYGK VRSIPHTVST PLAVSASRGV ACVFSSRRHA LVYILDEDEE EEGDEISDME
001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
Arabidopsis Description
APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.