Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040015_P001 | Maize | cytosol | 66.17 | 94.33 |
| Zm00001d038666_P002 | Maize | cytosol | 58.21 | 82.98 |
| Zm00001d052072_P003 | Maize | cytosol | 71.14 | 18.29 |
| EES05908 | Sorghum | cytosol | 66.67 | 17.4 |
| TraesCSU01G081200.2 | Wheat | cytosol | 62.19 | 16.13 |
| TraesCS6D01G327000.1 | Wheat | cytosol | 61.69 | 16.02 |
| TraesCS6B01G377000.1 | Wheat | cytosol | 61.19 | 15.85 |
| GSMUA_Achr10P... | Banana | cytosol | 7.46 | 15.15 |
| GSMUA_Achr10P... | Banana | extracellular, golgi | 32.34 | 13.29 |
| VIT_00s0181g00190.t01 | Wine grape | cytosol | 27.36 | 12.59 |
| VIT_00s0181g00210.t01 | Wine grape | cytosol | 44.78 | 11.67 |
| KRH49954 | Soybean | cytosol | 43.28 | 11.2 |
| AT4G21530.1 | Thale cress | cytosol | 42.29 | 10.94 |
| Bra013534.1-P | Field mustard | cytosol | 40.8 | 10.61 |
| CDX82833 | Canola | cytosol | 40.8 | 10.61 |
| CDX79070 | Canola | cytosol | 40.8 | 10.61 |
| Solyc02g079050.2.1 | Tomato | mitochondrion | 39.3 | 10.27 |
| Zm00001d045047_P002 | Maize | nucleus, plastid | 6.47 | 8.67 |
| GSMUA_Achr10P... | Banana | mitochondrion | 5.47 | 4.64 |
| Zm00001d052917_P001 | Maize | cytosol | 1.0 | 2.44 |
Protein Annotations
| EnsemblPlants:Zm00001d035596_P001 | EnsemblPlants:Zm00001d035596_T001 | EnsemblPlantsGene:Zm00001d035596 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005680 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0030071 | GO:GO:0031145 | InterPro:APC4 |
| PANTHER:PTHR13260 | ProteinID:AQK79335.1 | UniParc:UPI0004DEACFC | UniProt:A0A1D6LHI7 | MapMan:13.3.4.1.1.1.2 | : |
Description
Anaphase-promoting complex subunit 4
Coordinates
chr6:-:35981293..35982973
Molecular Weight (calculated)
21973.1 Da
IEP (calculated)
5.719
GRAVY (calculated)
-0.127
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEQIEEAS MAAAAVTPFQ LQFDKPIPFQ NGKMLRTTKS HDVAIVSLNW AEDSPLSKSD KDEFLSYEDR TTRFFSPPVM PRIGGLRSGD TGLADENEEA
101: IPEFSNASCQ RFNIVCSGGK DGCVCFSIFG IFPVGKIASK YSNSLVHNLN STKNSLSCML SPASAFPVIG FGDLSTLTAH LEICSTQKYF VKLICSFKQS
201: K
101: IPEFSNASCQ RFNIVCSGGK DGCVCFSIFG IFPVGKIASK YSNSLVHNLN STKNSLSCML SPASAFPVIG FGDLSTLTAH LEICSTQKYF VKLICSFKQS
201: K
001: MTYKRLMLLH KKRKNKQMKT EIEIRNVPDT EINQEQKNKE EEKRLKSALE GEEEGSDCFV FFGSYDVSYS NGLINISMGR VSYRFVIYKT KFIPVMNEDF
101: LTKVTWGLGV VQALESYVGL WLLCSSHQLV TRSPARHQVI SSLPRHSARS PAVQLVVSRL
101: LTKVTWGLGV VQALESYVGL WLLCSSHQLV TRSPARHQVI SSLPRHSARS PAVQLVVSRL
Arabidopsis Description
Uncharacterized protein AT4g12380 [Source:UniProtKB/TrEMBL;Acc:Q9STH3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.