Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040015_P001 | Maize | cytosol | 16.75 | 92.91 |
| EES05908 | Sorghum | cytosol | 89.0 | 90.39 |
| Zm00001d052917_P001 | Maize | cytosol | 9.21 | 87.8 |
| TraesCSU01G081200.2 | Wheat | cytosol | 76.6 | 77.29 |
| TraesCS6B01G377000.1 | Wheat | cytosol | 76.47 | 77.06 |
| TraesCS6D01G327000.1 | Wheat | cytosol | 76.21 | 77.0 |
| GSMUA_Achr10P... | Banana | cytosol | 9.34 | 73.74 |
| Zm00001d038666_P002 | Maize | cytosol | 12.92 | 71.63 |
| Zm00001d035596_P001 | Maize | cytosol | 18.29 | 71.14 |
| GSMUA_Achr10P... | Banana | extracellular, golgi | 32.99 | 52.76 |
| Solyc02g079050.2.1 | Tomato | mitochondrion | 51.79 | 52.67 |
| VIT_00s0181g00210.t01 | Wine grape | cytosol | 51.79 | 52.53 |
| VIT_00s0181g00190.t01 | Wine grape | cytosol | 28.64 | 51.26 |
| AT4G21530.1 | Thale cress | cytosol | 50.51 | 50.84 |
| CDX82833 | Canola | cytosol | 50.0 | 50.58 |
| CDX79070 | Canola | cytosol | 50.0 | 50.58 |
| Bra013534.1-P | Field mustard | cytosol | 50.0 | 50.58 |
| KRH49954 | Soybean | cytosol | 49.62 | 49.94 |
| Zm00001d045047_P002 | Maize | nucleus, plastid | 8.82 | 46.0 |
| GSMUA_Achr10P... | Banana | mitochondrion | 11.76 | 38.82 |
Protein Annotations
| MapMan:13.3.4.1.1.1.2 | UniProt:A0A1D6QCR7 | InterPro:APC4 | InterPro:APC4_long_dom | ProteinID:AQK56015.1 | InterPro:Apc4_WD40_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005680 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0030071 | GO:GO:0031145 | InterPro:IPR001680 |
| InterPro:IPR017986 | PFAM:PF12894 | PFAM:PF12896 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR13260 |
| SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0004DE8BBA | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| EnsemblPlantsGene:Zm00001d052072 | EnsemblPlants:Zm00001d052072_P003 | EnsemblPlants:Zm00001d052072_T003 | SEG:seg | : | : |
Description
Anaphase-promoting complex subunit 4
Coordinates
chr4:-:178595993..178607864
Molecular Weight (calculated)
86611.5 Da
IEP (calculated)
4.611
GRAVY (calculated)
-0.002
Length
782 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEQIEEAS MAAAAATPFQ LQFDKPIPFQ IKMAEWNPEK DLLAMVTDDS KVLLHRFNWQ RLWTISPGKC ITSICWSPDG KIIALGTEDG LILLHDVENG
101: KMLRTTKSHD VAIVSLNWAE DDPLSKSDKD EFLSYEDRTT RFFPPPPVMP RIGGLRSGDT GLADENEEAI PEFSSASCQR FNILCSGGKD GCVCFSVFGI
201: FPVGKINITK IPINVGSSRK SYQLQDASVS KVSLSRNLQK FVILCFGKLV DTDNLSDSCE NSGLHCLYLD TSIFFNRKNE LHQVSQQASS IQDMVEVVRA
301: SVSLISKQWS NAMSLFHEKF SALPNLISTH GVESSSEDEF LSLLFGTRTS PALHHFLASS LGEAGLKRIA KAVDSAGRDI RGIITEHLQP AVEIISFRLA
401: ELRGLSRWRS RFQTIGLDGN LIDGVTESIG MLVVQVERFS RVAATVVYLF QNFFAWVLKS VRILLNEPTD QVPAANSELV VIFLKFLLDK DPIKQLLEAD
501: ERIECDMDTA RHVEQLVVFG GFTDTQFLEK SLVNQFNELE DSLKEAFLMP FTAISSQIQC QGLLPLYPVT SSATLSSSCS PTSISFYKDE DSSHEESSYS
601: LTDYVCLKIP DGSLNKVNCI GVIKGSGNCC TTLSMMSLSG FLLHIPDGYE CVDLSLYKDN QVVLLLSETS CSDSPGKSWM VMLQIENFSF MPLSGTFPAN
701: IYSLQKLVVT ILISPMFDLL ALDLQLDTDY GKVRSIPHTV STPFAVSASR GVACVFSSRR HALVYILDED EEAEGDETSD ME
101: KMLRTTKSHD VAIVSLNWAE DDPLSKSDKD EFLSYEDRTT RFFPPPPVMP RIGGLRSGDT GLADENEEAI PEFSSASCQR FNILCSGGKD GCVCFSVFGI
201: FPVGKINITK IPINVGSSRK SYQLQDASVS KVSLSRNLQK FVILCFGKLV DTDNLSDSCE NSGLHCLYLD TSIFFNRKNE LHQVSQQASS IQDMVEVVRA
301: SVSLISKQWS NAMSLFHEKF SALPNLISTH GVESSSEDEF LSLLFGTRTS PALHHFLASS LGEAGLKRIA KAVDSAGRDI RGIITEHLQP AVEIISFRLA
401: ELRGLSRWRS RFQTIGLDGN LIDGVTESIG MLVVQVERFS RVAATVVYLF QNFFAWVLKS VRILLNEPTD QVPAANSELV VIFLKFLLDK DPIKQLLEAD
501: ERIECDMDTA RHVEQLVVFG GFTDTQFLEK SLVNQFNELE DSLKEAFLMP FTAISSQIQC QGLLPLYPVT SSATLSSSCS PTSISFYKDE DSSHEESSYS
601: LTDYVCLKIP DGSLNKVNCI GVIKGSGNCC TTLSMMSLSG FLLHIPDGYE CVDLSLYKDN QVVLLLSETS CSDSPGKSWM VMLQIENFSF MPLSGTFPAN
701: IYSLQKLVVT ILISPMFDLL ALDLQLDTDY GKVRSIPHTV STPFAVSASR GVACVFSSRR HALVYILDED EEAEGDETSD ME
001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
Arabidopsis Description
APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.