Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | extracellular, golgi | 62.7 | 56.03 |
| VIT_00s0181g00210.t01 | Wine grape | cytosol | 96.8 | 54.86 |
| Solyc02g079050.2.1 | Tomato | mitochondrion | 73.68 | 41.87 |
| KRH49954 | Soybean | cytosol | 73.46 | 41.31 |
| AT4G21530.1 | Thale cress | cytosol | 68.42 | 38.48 |
| Bra013534.1-P | Field mustard | cytosol | 67.51 | 38.16 |
| CDX82833 | Canola | cytosol | 67.28 | 38.03 |
| CDX79070 | Canola | cytosol | 67.28 | 38.03 |
| Zm00001d040015_P001 | Maize | cytosol | 11.9 | 36.88 |
| Zm00001d038666_P002 | Maize | cytosol | 11.44 | 35.46 |
| TraesCS6D01G327000.1 | Wheat | cytosol | 54.23 | 30.62 |
| TraesCSU01G081200.2 | Wheat | cytosol | 54.0 | 30.45 |
| TraesCS6B01G377000.1 | Wheat | cytosol | 54.0 | 30.41 |
| EES05908 | Sorghum | cytosol | 51.26 | 29.09 |
| Zm00001d052072_P003 | Maize | cytosol | 51.26 | 28.64 |
| Zm00001d035596_P001 | Maize | cytosol | 12.59 | 27.36 |
| Zm00001d052917_P001 | Maize | cytosol | 0.92 | 4.88 |
| GSMUA_Achr10P... | Banana | mitochondrion | 1.14 | 2.11 |
| Os02t0785900-00 | Rice | cytosol | 0.46 | 1.38 |
| GSMUA_Achr10P... | Banana | cytosol | 0.0 | 0.0 |
| Zm00001d045047_P002 | Maize | nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:13.3.4.1.1.1.2 | InterPro:APC4 | InterPro:APC4_long_dom | ProteinID:CCB48280 | ProteinID:CCB48280.1 | UniProt:F6H7T8 |
| EMBL:FN595252 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0019538 | GO:GO:0030071 | GO:GO:0031145 | PFAM:PF12896 | PANTHER:PTHR13260 | UniParc:UPI000210958E |
| ArrayExpress:VIT_00s0181g00190 | EnsemblPlantsGene:VIT_00s0181g00190 | EnsemblPlants:VIT_00s0181g00190.t01 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrUn:+:7833463..7851941
Molecular Weight (calculated)
49422.5 Da
IEP (calculated)
5.305
GRAVY (calculated)
-0.093
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQYPPDSGN ILAYEDRTSR FFPPAPRVPR MPGLVSGDTG FMDDSEDSFG ELSNSSHQRF NILCSGDKDG SICFSIFGIF PIGKINIHEF SVSTLLMDNQ
101: VTYRLLNASI CKVALSKDLC HLIVTCSGEL VEQSVESRDR HIFGHGLLGL HSLVLNTSIF WKRKNELHQV AQQASNIEDL TEVIRASLSV MCKQWSDAMH
201: MFHEKFDSLS SLIIDHGLDS SPQEEFLSLL CGARTSPPLH QFLVSSLGEV GLKRVSKAVS NAGKELQLIV LDHLQPAAEI IGFRMGELRG LSRWRTRYKV
301: IGLDERLIDN ATEKAGMLLV QVERFMMILS SAVQQFSNFF SWLLKCIKLL MSETSDQLLP FNSELVIIFL RFLYDQDPVR QLLELSEVDH NIEIELETMQ
401: KIKELVQLGG FSDSEYLQRT MAKEFQQMES RCSHSEG
101: VTYRLLNASI CKVALSKDLC HLIVTCSGEL VEQSVESRDR HIFGHGLLGL HSLVLNTSIF WKRKNELHQV AQQASNIEDL TEVIRASLSV MCKQWSDAMH
201: MFHEKFDSLS SLIIDHGLDS SPQEEFLSLL CGARTSPPLH QFLVSSLGEV GLKRVSKAVS NAGKELQLIV LDHLQPAAEI IGFRMGELRG LSRWRTRYKV
301: IGLDERLIDN ATEKAGMLLV QVERFMMILS SAVQQFSNFF SWLLKCIKLL MSETSDQLLP FNSELVIIFL RFLYDQDPVR QLLELSEVDH NIEIELETMQ
401: KIKELVQLGG FSDSEYLQRT MAKEFQQMES RCSHSEG
001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
Arabidopsis Description
APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.