Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G081200.2 | Wheat | cytosol | 98.06 | 97.94 |
| TraesCS6B01G377000.1 | Wheat | cytosol | 96.12 | 95.88 |
| Os02t0785900-00 | Rice | cytosol | 15.5 | 82.76 |
| EES05908 | Sorghum | cytosol | 79.07 | 79.48 |
| Zm00001d040015_P001 | Maize | cytosol | 14.34 | 78.72 |
| Zm00001d052072_P003 | Maize | cytosol | 77.0 | 76.21 |
| GSMUA_Achr10P... | Banana | cytosol | 9.3 | 72.73 |
| Zm00001d035596_P001 | Maize | cytosol | 16.02 | 61.69 |
| Zm00001d038666_P002 | Maize | cytosol | 10.98 | 60.28 |
| VIT_00s0181g00210.t01 | Wine grape | cytosol | 54.52 | 54.73 |
| VIT_00s0181g00190.t01 | Wine grape | cytosol | 30.62 | 54.23 |
| GSMUA_Achr10P... | Banana | extracellular, golgi | 34.24 | 54.19 |
| Solyc02g079050.2.1 | Tomato | mitochondrion | 53.49 | 53.84 |
| CDX79070 | Canola | cytosol | 52.2 | 52.26 |
| KRH49954 | Soybean | cytosol | 52.45 | 52.25 |
| Bra013534.1-P | Field mustard | cytosol | 52.07 | 52.13 |
| CDX82833 | Canola | cytosol | 51.81 | 51.88 |
| AT4G21530.1 | Thale cress | cytosol | 51.94 | 51.74 |
| GSMUA_Achr10P... | Banana | mitochondrion | 11.89 | 38.82 |
Protein Annotations
| MapMan:13.3.4.1.1.1.2 | Gene3D:2.130.10.10 | InterPro:APC4 | InterPro:APC4_long_dom | InterPro:Apc4_WD40_dom | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005680 | GO:GO:0007049 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0019538 | GO:GO:0030071 | GO:GO:0031145 | GO:GO:0048481 | InterPro:IPR001680 |
| InterPro:IPR015943 | PFAM:PF12894 | PFAM:PF12896 | PANTHER:PTHR13260 | SMART:SM00320 | SUPFAM:SSF50978 |
| EnsemblPlantsGene:TraesCS6D01G327000 | EnsemblPlants:TraesCS6D01G327000.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
No Description!
Coordinates
chr6D:+:431924301..431931809
Molecular Weight (calculated)
86441.9 Da
IEP (calculated)
4.905
GRAVY (calculated)
-0.106
Length
774 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEQMEEAS SSAAASGTPF QLQFDKPIPF QIKLAEWNPE KDLLAMVTDD SKVLLHRFNW QRLWTISPGK CITSICWSPD GKIVALGTED GFVLLHDVEN
101: GKMLRSIKSH DVAIICLNWA EDEPLSRTDK EDLLSYEDRT TRFFPPAPVM PRIGGLNSGD TGLADENEEA IQAFSSASCQ RFNILCTGDK DGCICFSIFG
201: IFPIGKININ KVPIHVQSSG KRTSYRLQDV SISKVSLSRN LHQLVLLCSG KLINTDNLSL SNDLSVGVHC LHLDTSIFSN RKNELHQVSQ QASSIQDLVE
301: VVRASISMMS KQWSNAMNLF HEKFSALPSL LTAHGMESSS EDEFMSLLFG THTSPALHQF LVSSLGEAGL KRIAKTIESA GRELRIVVSE HLQPAVEIIS
401: FRLAELRGLA RWRSRFQNIG LDEKLMDGVT ERVGMLVVQV ERFSRVAATV LYLFQNFLSW VLKCVKILLS EPTDQVPSTN SELVVIFLKF LLDKDPIKQL
501: LETDQIFEWD IDTAKHVEHL VVFGGFTDTK FLERSLAKQF SELEESLKEA FLMPFTTVSS QIHCQGLLPL YPVTSSDALS STSTPASIAF YKDKDSQHNA
601: SSYSSTDYIC FKIPDGSLNL RNFVAVIKDF CNSCSTSNTP SLSGFLLHIP VEYECVDLSL YKDNQVVLLL SGKSSSENAG RSWMVMLQTE NLSFSQFSRT
701: FPANYYNLQE LEALELQLDT DYGKVRSVPH PLSTPLAVSA SRGVACIFSS RRHALVYILD EDEDEDEDEG SEME
101: GKMLRSIKSH DVAIICLNWA EDEPLSRTDK EDLLSYEDRT TRFFPPAPVM PRIGGLNSGD TGLADENEEA IQAFSSASCQ RFNILCTGDK DGCICFSIFG
201: IFPIGKININ KVPIHVQSSG KRTSYRLQDV SISKVSLSRN LHQLVLLCSG KLINTDNLSL SNDLSVGVHC LHLDTSIFSN RKNELHQVSQ QASSIQDLVE
301: VVRASISMMS KQWSNAMNLF HEKFSALPSL LTAHGMESSS EDEFMSLLFG THTSPALHQF LVSSLGEAGL KRIAKTIESA GRELRIVVSE HLQPAVEIIS
401: FRLAELRGLA RWRSRFQNIG LDEKLMDGVT ERVGMLVVQV ERFSRVAATV LYLFQNFLSW VLKCVKILLS EPTDQVPSTN SELVVIFLKF LLDKDPIKQL
501: LETDQIFEWD IDTAKHVEHL VVFGGFTDTK FLERSLAKQF SELEESLKEA FLMPFTTVSS QIHCQGLLPL YPVTSSDALS STSTPASIAF YKDKDSQHNA
601: SSYSSTDYIC FKIPDGSLNL RNFVAVIKDF CNSCSTSNTP SLSGFLLHIP VEYECVDLSL YKDNQVVLLL SGKSSSENAG RSWMVMLQTE NLSFSQFSRT
701: FPANYYNLQE LEALELQLDT DYGKVRSVPH PLSTPLAVSA SRGVACIFSS RRHALVYILD EDEDEDEDEG SEME
001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
Arabidopsis Description
APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.