Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0181g00190.t01 | Wine grape | cytosol | 54.86 | 96.8 |
| KRH49954 | Soybean | cytosol | 73.02 | 72.46 |
| Zm00001d052917_P001 | Maize | cytosol | 7.65 | 71.95 |
| Solyc02g079050.2.1 | Tomato | mitochondrion | 71.34 | 71.52 |
| GSMUA_Achr10P... | Banana | cytosol | 8.95 | 69.7 |
| AT4G21530.1 | Thale cress | cytosol | 69.13 | 68.6 |
| CDX79070 | Canola | cytosol | 68.61 | 68.43 |
| CDX82833 | Canola | cytosol | 68.48 | 68.31 |
| Bra013534.1-P | Field mustard | cytosol | 68.35 | 68.18 |
| Os02t0785900-00 | Rice | cytosol | 12.19 | 64.83 |
| GSMUA_Achr10P... | Banana | extracellular, golgi | 38.52 | 60.74 |
| Zm00001d040015_P001 | Maize | cytosol | 10.25 | 56.03 |
| TraesCSU01G081200.2 | Wheat | cytosol | 55.25 | 54.97 |
| TraesCS6B01G377000.1 | Wheat | cytosol | 54.99 | 54.64 |
| TraesCS6D01G327000.1 | Wheat | cytosol | 54.73 | 54.52 |
| EES05908 | Sorghum | cytosol | 52.79 | 52.86 |
| Zm00001d052072_P003 | Maize | cytosol | 52.53 | 51.79 |
| Zm00001d038666_P002 | Maize | cytosol | 8.43 | 46.1 |
| Zm00001d035596_P001 | Maize | cytosol | 11.67 | 44.78 |
| GSMUA_Achr10P... | Banana | mitochondrion | 12.71 | 41.35 |
| Zm00001d045047_P002 | Maize | nucleus, plastid | 6.49 | 33.33 |
Protein Annotations
| EntrezGene:100255109 | wikigene:100255109 | MapMan:13.3.4.1.1.1.2 | InterPro:APC4 | InterPro:APC4_long_dom | InterPro:Apc4_WD40_dom |
| ProteinID:CBI23321 | ProteinID:CBI23321.3 | UniProt:E0CVY8 | EMBL:FN595252 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0019538 | GO:GO:0030071 | GO:GO:0031145 | InterPro:IPR001680 | InterPro:IPR017986 | EntrezGene:LOC100255109 |
| wikigene:LOC100255109 | PFAM:PF12894 | PFAM:PF12896 | PFscan:PS50294 | PANTHER:PTHR13260 | SMART:SM00320 |
| SUPFAM:SSF50978 | TIGR:TC59611 | UniParc:UPI0001BE1DAB | ArrayExpress:VIT_00s0181g00210 | EnsemblPlantsGene:VIT_00s0181g00210 | EnsemblPlants:VIT_00s0181g00210.t01 |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | RefSeq:XP_002271089 | RefSeq:XP_002271089.2 | RefSeq:XP_010646155.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:7889147..7905719
Molecular Weight (calculated)
86787.2 Da
IEP (calculated)
4.885
GRAVY (calculated)
-0.073
Length
771 amino acids
Sequence
(BLAST)
(BLAST)
001: METDEVEQGL PFQLQFDKPV PAQIKIAEWN PEKDLLAMVT EDSKILLHRF NWQRLWTISP GRCITSLCWR PDGKAIAVGL EDGTVSLHDV ENGKLLRSMK
101: SHTVAVVCLN WEEDGQLIGD SGNILAYEDR TSRFFPPAPR VPRMPGLVSG DTGFMDDSED SFGELSNSSH QRFNILCSGD KDGSICFSIF GMFPIGKINI
201: HEFSVSTLLM DNQVTYRLLN ASICKVALSK DLCHLIVTCS GELVEESVES RDRHIFGHGL LGLHSLVLDT SIFWKRKNEL HQVAQQASNI EDLTEVIRAS
301: LSVMCKQWSD AMHMFHEKFD SLSSLIIDHG LDSSPQEEFL SLLCGARTSP PLHQFLVSSL GEVGLKRVSK AVSNAGKELQ FIVLDHLQPA AEIIGFRMGE
401: LRGLSRWRTR YKVIGLDERL IDNATEKAGM LLVQVERFMM ILSSAVQQFS NFFSWLLKCI KLLMSETSDQ LLPFNSELVI IFLRFLYDQD PVRQLLELSE
501: VDHNIEIELE TMQKIKELVQ LGGFSDSEYL QRTMAKEFQQ MESSFKEAFA MPFTTVSEKI LCEDLLPMFP CPSSPFNVPM SISYYKDISQ AVSTYQTCQH
601: RFIDYIAFKV PDESFSDVAN CIGIARGFMH DSSSVKKGYT SLEAVLLSVP DGYHCVDLSL YKESQMVLLL NETTSTSESS GSAHMLVVQV TDLPFVSVPR
701: STNLNYWKLH ELKDSITYLQ MENEKVRSIP HSAIAPLAVS ASRGVACVFA ARKRALVYIL EEDEDEATDA E
101: SHTVAVVCLN WEEDGQLIGD SGNILAYEDR TSRFFPPAPR VPRMPGLVSG DTGFMDDSED SFGELSNSSH QRFNILCSGD KDGSICFSIF GMFPIGKINI
201: HEFSVSTLLM DNQVTYRLLN ASICKVALSK DLCHLIVTCS GELVEESVES RDRHIFGHGL LGLHSLVLDT SIFWKRKNEL HQVAQQASNI EDLTEVIRAS
301: LSVMCKQWSD AMHMFHEKFD SLSSLIIDHG LDSSPQEEFL SLLCGARTSP PLHQFLVSSL GEVGLKRVSK AVSNAGKELQ FIVLDHLQPA AEIIGFRMGE
401: LRGLSRWRTR YKVIGLDERL IDNATEKAGM LLVQVERFMM ILSSAVQQFS NFFSWLLKCI KLLMSETSDQ LLPFNSELVI IFLRFLYDQD PVRQLLELSE
501: VDHNIEIELE TMQKIKELVQ LGGFSDSEYL QRTMAKEFQQ MESSFKEAFA MPFTTVSEKI LCEDLLPMFP CPSSPFNVPM SISYYKDISQ AVSTYQTCQH
601: RFIDYIAFKV PDESFSDVAN CIGIARGFMH DSSSVKKGYT SLEAVLLSVP DGYHCVDLSL YKESQMVLLL NETTSTSESS GSAHMLVVQV TDLPFVSVPR
701: STNLNYWKLH ELKDSITYLQ MENEKVRSIP HSAIAPLAVS ASRGVACVFA ARKRALVYIL EEDEDEATDA E
001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
Arabidopsis Description
APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.