Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G081200.2 | Wheat | cytosol | 96.39 | 96.52 |
| TraesCS6D01G327000.1 | Wheat | cytosol | 95.88 | 96.12 |
| Os02t0785900-00 | Rice | cytosol | 15.59 | 83.45 |
| EES05908 | Sorghum | cytosol | 78.87 | 79.48 |
| Zm00001d040015_P001 | Maize | cytosol | 14.18 | 78.01 |
| Zm00001d052072_P003 | Maize | cytosol | 77.06 | 76.47 |
| GSMUA_Achr10P... | Banana | cytosol | 9.41 | 73.74 |
| Zm00001d035596_P001 | Maize | cytosol | 15.85 | 61.19 |
| Zm00001d038666_P002 | Maize | cytosol | 11.08 | 60.99 |
| VIT_00s0181g00210.t01 | Wine grape | cytosol | 54.64 | 54.99 |
| Solyc02g079050.2.1 | Tomato | mitochondrion | 53.74 | 54.23 |
| GSMUA_Achr10P... | Banana | extracellular, golgi | 34.15 | 54.19 |
| VIT_00s0181g00190.t01 | Wine grape | cytosol | 30.41 | 54.0 |
| KRH49954 | Soybean | cytosol | 52.45 | 52.38 |
| CDX79070 | Canola | cytosol | 52.06 | 52.26 |
| Bra013534.1-P | Field mustard | cytosol | 52.06 | 52.26 |
| AT4G21530.1 | Thale cress | cytosol | 52.06 | 51.99 |
| CDX82833 | Canola | cytosol | 51.68 | 51.88 |
| GSMUA_Achr10P... | Banana | mitochondrion | 12.11 | 39.66 |
Protein Annotations
| MapMan:13.3.4.1.1.1.2 | Gene3D:2.130.10.10 | InterPro:APC4 | InterPro:APC4_long_dom | InterPro:Apc4_WD40_dom | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005680 | GO:GO:0007049 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0019538 | GO:GO:0030071 | GO:GO:0031145 | GO:GO:0048481 | InterPro:IPR001680 |
| InterPro:IPR015943 | PFAM:PF12894 | PFAM:PF12896 | PFscan:PS50082 | PANTHER:PTHR13260 | SMART:SM00320 |
| SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS6B01G377000 | EnsemblPlants:TraesCS6B01G377000.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:651994727..652002976
Molecular Weight (calculated)
86740.2 Da
IEP (calculated)
4.986
GRAVY (calculated)
-0.117
Length
776 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEQMEEAA SSSAAASGTP FQLQFDKPIP FQIKLAEWNP EKDLLAMVTD DSKVLLHRFN WQRLWTISPG KCITSICWSP DGKIVALGTE DGLVLLHDVE
101: NGKMLRSIKS HDVAIVCLNW AEDEPLSRTD KKDLLSYEDR TTRFFPPAPV MPRIGGLNSG DTGLADENEE AIQAFSSASC QWFNILSTGD KDGCICFSIF
201: GIFPVGKINI NKVPIHVQSS GKRTSYRLQD VSISKVSLSR NLHQLVLLCS GKLINTDNLS LSYDISVGVH CLHLDTSIFS NRKNELHQVS QQASSIQDLV
301: EVVRASISMM SKQWSNAMNL FHEKFSALPS LLTAHGMESS SEDEFMSLLF GTHTSPALHQ FLVSSLGEAG LKRIAKTIES AGRELRIVVS EHLQPAVEII
401: SFRLAELRGL ARWRSRFQNI GLDEKLMDGV TERVGMLVVQ VERFSRVAAT VLYLFQNFFS WVLKCVKILL SEPTDQVPST NSELVVIFLK FLLDKDPIKQ
501: LLETDQIFEW DIDTTKHVEH LVAFGGFTDT QFLERSLAKQ FMELEESLKE AFLMPFTTIS SQIHCQGLLP LYPVTSSDAS PSTSTPASIA FYKQDKDSQH
601: SASSYSSTDY ICFKIPDGSL NLRNFVAVIK DFCNSRSTSS TPSLSGFLLH IPVEYECVDL SLYKDNQVVL LLSGKSSSES AGRSWMVMLQ TENLSFSQLS
701: RTFPANYYNL QELEVLEHQL DTNYGKVRSI PHALSTPLAV SASRGVACVF SSRRHALVYI LDEDEDEDED EDSEME
101: NGKMLRSIKS HDVAIVCLNW AEDEPLSRTD KKDLLSYEDR TTRFFPPAPV MPRIGGLNSG DTGLADENEE AIQAFSSASC QWFNILSTGD KDGCICFSIF
201: GIFPVGKINI NKVPIHVQSS GKRTSYRLQD VSISKVSLSR NLHQLVLLCS GKLINTDNLS LSYDISVGVH CLHLDTSIFS NRKNELHQVS QQASSIQDLV
301: EVVRASISMM SKQWSNAMNL FHEKFSALPS LLTAHGMESS SEDEFMSLLF GTHTSPALHQ FLVSSLGEAG LKRIAKTIES AGRELRIVVS EHLQPAVEII
401: SFRLAELRGL ARWRSRFQNI GLDEKLMDGV TERVGMLVVQ VERFSRVAAT VLYLFQNFFS WVLKCVKILL SEPTDQVPST NSELVVIFLK FLLDKDPIKQ
501: LLETDQIFEW DIDTTKHVEH LVAFGGFTDT QFLERSLAKQ FMELEESLKE AFLMPFTTIS SQIHCQGLLP LYPVTSSDAS PSTSTPASIA FYKQDKDSQH
601: SASSYSSTDY ICFKIPDGSL NLRNFVAVIK DFCNSRSTSS TPSLSGFLLH IPVEYECVDL SLYKDNQVVL LLSGKSSSES AGRSWMVMLQ TENLSFSQLS
701: RTFPANYYNL QELEVLEHQL DTNYGKVRSI PHALSTPLAV SASRGVACVF SSRRHALVYI LDEDEDEDED EDSEME
001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
Arabidopsis Description
APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.