Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 3
- nucleus 1
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0181g00190.t01 | Wine grape | cytosol | 56.03 | 62.7 |
| Zm00001d040015_P001 | Maize | cytosol | 12.07 | 41.84 |
| VIT_00s0181g00210.t01 | Wine grape | cytosol | 60.74 | 38.52 |
| Zm00001d038666_P002 | Maize | cytosol | 11.04 | 38.3 |
| Solyc02g079050.2.1 | Tomato | mitochondrion | 59.71 | 37.97 |
| KRH49954 | Soybean | cytosol | 58.49 | 36.81 |
| Bra013534.1-P | Field mustard | cytosol | 57.06 | 36.09 |
| CDX79070 | Canola | cytosol | 57.06 | 36.09 |
| AT4G21530.1 | Thale cress | cytosol | 57.06 | 35.91 |
| CDX82833 | Canola | cytosol | 56.65 | 35.83 |
| TraesCS6D01G327000.1 | Wheat | cytosol | 54.19 | 34.24 |
| TraesCS6B01G377000.1 | Wheat | cytosol | 54.19 | 34.15 |
| EES05908 | Sorghum | cytosol | 53.37 | 33.9 |
| TraesCSU01G081200.2 | Wheat | cytosol | 53.58 | 33.81 |
| Zm00001d052072_P003 | Maize | cytosol | 52.76 | 32.99 |
| Zm00001d035596_P001 | Maize | cytosol | 13.29 | 32.34 |
| Os02t0785900-00 | Rice | cytosol | 4.5 | 15.17 |
| Zm00001d052917_P001 | Maize | cytosol | 1.43 | 8.54 |
| GSMUA_Achr10P... | Banana | cytosol | 1.64 | 8.08 |
| Zm00001d045047_P002 | Maize | nucleus, plastid | 1.02 | 3.33 |
| GSMUA_Achr10P... | Banana | mitochondrion | 1.23 | 2.53 |
Protein Annotations
| MapMan:13.3.4.1.1.1.2 | InterPro:APC4 | InterPro:APC4_long_dom | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005680 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0030071 | GO:GO:0031145 | EnsemblPlantsGene:GSMUA_Achr10G05620_001 |
| EnsemblPlants:GSMUA_Achr10P05620_001 | EnsemblPlants:GSMUA_Achr10T05620_001 | UniProt:M0RFN9 | PFAM:PF12896 | PANTHER:PTHR13260 | UniParc:UPI000295DBEB |
| SEG:seg | : | : | : | : | : |
Description
Anaphase-promoting complex subunit 4 [Source:GMGC_GENE;Acc:GSMUA_Achr10G05620_001]
Coordinates
chr10:-:15922110..15943626
Molecular Weight (calculated)
55530.1 Da
IEP (calculated)
5.880
GRAVY (calculated)
-0.023
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIVFIAYRI HVTSNIMLFV VHLQNGKLLK SIKSHSVAVI CLNWEEEAHI EKGEIDSAFV YEDRTRRFFP PAPRVPRMPG LNAGDAGFMD DLEDTFHELS
101: TSPRQHFNML SSGDKDGCIC FSIFGIFPIG KINIHKLSLC APFLDKTATF QLLNASIHQL ALSKDLSQLV VLSFGELEEN LVKPKGKNVQ KDEEYAEVQK
201: FSHTGDSSVG LHCLLLNTSI FLDRKNELQQ VAQQASSIED LVEVVRASLS VMSKQWSEAM HSFHEKFDPL SSLIVSHGLD SNPQDEFLSV LFGARTSPPL
301: HQFLVNSLGE AGLKRVCKAV DTAGKELHSV IHEHLQPAVE IIGFRIAELR GLSRWRARYH IIGLDEKLID SATEKAGMLL VHVERFLRIL AIVLYQFQNF
401: FNWVLRYIKI LMSEPIDQIQ PANSELIVVF LKFLLDHDPI GELLEVNKII EVDVDTMQRI EQLVMFGGYS DTNYLEKTLS DEFNQLEQW
101: TSPRQHFNML SSGDKDGCIC FSIFGIFPIG KINIHKLSLC APFLDKTATF QLLNASIHQL ALSKDLSQLV VLSFGELEEN LVKPKGKNVQ KDEEYAEVQK
201: FSHTGDSSVG LHCLLLNTSI FLDRKNELQQ VAQQASSIED LVEVVRASLS VMSKQWSEAM HSFHEKFDPL SSLIVSHGLD SNPQDEFLSV LFGARTSPPL
301: HQFLVNSLGE AGLKRVCKAV DTAGKELHSV IHEHLQPAVE IIGFRIAELR GLSRWRARYH IIGLDEKLID SATEKAGMLL VHVERFLRIL AIVLYQFQNF
401: FNWVLRYIKI LMSEPIDQIQ PANSELIVVF LKFLLDHDPI GELLEVNKII EVDVDTMQRI EQLVMFGGYS DTNYLEKTLS DEFNQLEQW
001: MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
101: NLKPHDVAVV CLNWEEDGQS NTDESGNFSV YEDRTSRFFP PAPRPPKMPG LVAGDSSFMD DGEDSLAELS NTSFRKFNIL CTGDRDGNIC FSIFGIFQIG
201: KINIHELSLP VPHLDEHASC KLFNASIYKV ALSKDLCRLV VMCTGELKDC DIKPREEKIN VQDLPGLHCL AMDTSIFWKR KYELHQVAQQ ASNIEDLTEV
301: IRASLSVMNK QWADAMKTFH EKFHSLSTLI IDNGLESSPQ EEFLSLLGGA RISPALNQFL VNSLGEVGVK RVLKSVCGTG KELQQVVLDH LQPAAEIIGF
401: RIGELRGLSR WRARYQGIGL DEMLLNEATE NTGLLLVQVQ RFMMVLSSVV QQFSNFFNWL VRSIKYLMQE PNDQLLSYNS ELLVVFLKFL YDQDPVKDLL
501: ELSEAGDDIE IDLKTIGRVK ELLQFGGFSE CDFLQRTLAK EFQHMESSFK MAFQMPFTTI SRKISCMKLL PLCPLQLSTT QTPTTIPMSL SFYKNELSDD
601: TPCQSGYTDY ISFQVPDETF PEISNCIGIA KGYKQNSNNE KNGYTSLEAV LLSVPNGYTC VDLSLYKDKE LVLLLNKTNT DSEGSGEACM MVVQTGDLAF
701: ISISGSSSLN QWELEDLKGS IVNLEMENEK VRKVPHSVIA PLAVSASRGV ACVFAERRRA LVYILEEDED EEISDEK
Arabidopsis Description
APC4Anaphase-promoting complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O65418]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.